3KEU Crystal Structure of Human PL Kinase with bound PLP and ATP date
authors Safo, M.K., Gandhi, A.K., Musayev, F.N.
compound source
symmetry
R_factor
R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand ATP, MG, MPD, NA, PLP, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • pyridoxal kinase activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (3keu.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 3KEU
  • CSU: Contacts of Structural Units for 3KEU
  • Structure Factors (506 Kb)
  • Retrieve 3KEU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KEU from S2C, [Save to disk]
  • Re-refined 3keu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KEU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3KEU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3KEU, from MSDmotif at EBI
  • Fold representative 3keu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3keu_A] [3keu] [3keu_B]
  • SWISS-PROT database: [O00764]
  • Domain organization of [PDXK_HUMAN] by SWISSPFAM
  • Other resources with information on 3KEU
  • Community annotation for 3KEU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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