3S67 Crystal structure of V57P mutant of human cystatin C date
authors Orlikowska, M., Szymanska, A., Borek, D., Otwinowski, Z., Skowron, P., Jankowska, E.
compound source
symmetry
R_factor
R_Free 0.22890
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.26
ligand ACT, CL, IMD, PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • endopeptidase inhibitor acti...
  • cysteine-type endopeptidase ...
  • negative regulation of pepti...

  • Primary referenceStructural characterization of V57D and V57P mutants of human cystatin C, an amyloidogenic protein., Orlikowska M, Szymanska A, Borek D, Otwinowski Z, Skowron P, Jankowska E, Acta Crystallogr D Biol Crystallogr. 2013 Apr;69(Pt 4):577-86. doi:, 10.1107/S0907444912051657. Epub 2013 Mar 14. PMID:23519666
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (3s67.pdb1.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 3S67
  • CSU: Contacts of Structural Units for 3S67
  • Structure Factors (173 Kb)
  • Retrieve 3S67 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3S67 from S2C, [Save to disk]
  • Re-refined 3s67 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3S67 in 3D
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3S67
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3S67, from MSDmotif at EBI
  • Fold representative 3s67 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3s67_A] [3s67]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3S67: [CY ] by SMART
  • Other resources with information on 3S67
  • Community annotation for 3S67 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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