3TZB Oxidoreductase date Sep 27, 2011
title Quinone Oxidoreductase (Nq02) Bound To Nsc13000
authors M.S.Dunstan, D.Leys
compound source
Molecule: Ribosyldihydronicotinamide Dehydrogenase [Quinone
Chain: A, B, C, D
Synonym: Nrh Dehydrogenase [Quinone] 2, Nrh:Quinone Oxidore Quinone Reductase 2, Qr2;
Ec: 1.10.99.2
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nqo2, Nmor2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor 0.167 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.620 62.101 78.506 92.95 90.10 110.45
method X-Ray Diffractionresolution 2.19 Å
ligand AA, FAD, ZN enzyme Oxidoreductase E.C.1.10.99.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • electron transfer activity


    • Primary referenceIn silico screening reveals structurally diverse, nanomolar inhibitors of NQO2 that are functionally active in cells and can modulate NF-kappaB signaling., Nolan KA, Dunstan MS, Caraher MC, Scott KA, Leys D, Stratford IJ, Mol Cancer Ther. 2012 Jan;11(1):194-203. doi: 10.1158/1535-7163.MCT-11-0543. Epub, 2011 Nov 16. PMID:22090421
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (311 Kb) [Save to disk]
  • Biological Unit Coordinates (3tzb.pdb1.gz) 153 Kb
  • Biological Unit Coordinates (3tzb.pdb2.gz) 155 Kb
  • LPC: Ligand-Protein Contacts for 3TZB
  • CSU: Contacts of Structural Units for 3TZB
  • Structure Factors (641 Kb)
  • Retrieve 3TZB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3TZB from S2C, [Save to disk]
  • Re-refined 3tzb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3TZB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3TZB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3TZB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3tzb_A] [3tzb_C] [3tzb_B] [3tzb] [3tzb_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3TZB
  • Community annotation for 3TZB at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science