3UMO Crystal structure of the Phosphofructokinase-2 from Escherichia coli in complex with Potassium date
authors Pereira, H.M., Caniuguir, A., Baez, M., Cabrera, R., Garratt, R.C., Babul, J.
compound source
R_Free 0.2079
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand ATP, K, MG enzyme
A, B
  • 6-phosphofructokinase activi...
  • phosphofructokinase activity...

  • Primary referenceA Ribokinase Family Conserved Monovalent Cation Binding Site Enhances the MgATP-induced Inhibition in E. coli Phosphofructokinase-2., Baez M, Cabrera R, Pereira HM, Blanco A, Villalobos P, Ramirez-Sarmiento CA, Caniuguir A, Guixe V, Garratt RC, Babul J, Biophys J. 2013 Jul 2;105(1):185-93. doi: 10.1016/j.bpj.2013.05.028. PMID:23823238
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (211 Kb) [Save to disk]
  • Biological Unit Coordinates (3umo.pdb1.gz) 406 Kb
  • Biological Unit Coordinates (3umo.pdb2.gz) 205 Kb
  • LPC: Ligand-Protein Contacts for 3UMO
  • CSU: Contacts of Structural Units for 3UMO
  • Structure Factors (530 Kb)
  • Retrieve 3UMO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UMO from S2C, [Save to disk]
  • Re-refined 3umo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UMO in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UMO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UMO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3umo] [3umo_B] [3umo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3UMO
  • Community annotation for 3UMO at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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