4LJH Crystal Structure of Pseudomonas aeruginosa Lectin LecA Complexed with 1-Methyl-3-indolyl-b-D-galactopyranoside at 1.45 A Resolution date
authors Kadam, R.U., Stocker, A., Reymond, J.L.
compound source
symmetry
R_factor
R_Free 0.2112
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.45
ligand CA, GAL, MHD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCH-pi "T-Shape" Interaction with Histidine Explains Binding of Aromatic Galactosides to Pseudomonas aeruginosa Lectin LecA., Kadam RU, Garg D, Schwartz J, Visini R, Sattler M, Stocker A, Darbre T, Reymond JL, ACS Chem Biol. 2013 Sep 20;8(9):1925-30. doi: 10.1021/cb400303w. Epub 2013 Jul, 31. PMID:23869965
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (161 Kb) [Save to disk]
  • Biological Unit Coordinates (4ljh.pdb1.gz) 155 Kb
  • LPC: Ligand-Protein Contacts for 4LJH
  • CSU: Contacts of Structural Units for 4LJH
  • Structure Factors (2435 Kb)
  • Retrieve 4LJH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4LJH from S2C, [Save to disk]
  • Re-refined 4ljh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4LJH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4LJH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4LJH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ljh_C] [4ljh_B] [4ljh] [4ljh_D] [4ljh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4LJH
  • Community annotation for 4LJH at PDBWiki (http://pdbwiki.org)

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