OCA Atlas for 4MXW

4MXW

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
A, X
B, D, Z, Y
R, S

Primary reference

Dimerization of LTbetaR by LTalpha1beta2 is necessary and sufficient for signal transduction., Sudhamsu J, Yin J, Chiang EY, Starovasnik MA, Grogan JL, Hymowitz SG, Proc Natl Acad Sci U S A. 2013 Dec 3;110(49):19896-901. doi:, 10.1073/pnas.1310838110. Epub 2013 Nov 18. PMID:24248355

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk]

Biological Unit Coordinates (4mxw.pdb1.gz) 144 Kb

Biological Unit Coordinates (4mxw.pdb2.gz) 153 Kb

CSU: Contacts of Structural Units for 4MXW

Structure Factors (312 Kb)

Retrieve 4MXW in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4MXW from S2C, [Save to disk]

Re-refined 4mxw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4MXW in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4mxw] [4mxw_A] [4mxw_B] [4mxw_D] [4mxw_H] [4mxw_L] [4mxw_R] [4mxw_S] [4mxw_V] [4mxw_W] [4mxw_X] [4mxw_Y] [4mxw_Z]

SWISS-PROT database:

Domains found in 4MXW: [IG_like] [IGv] [TNF] [TNFR ] by SMART

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