4V46 Cytokine date 3-0 20, 1998
authors H.M.Kim, K.S.Yu, M.E.Lee, D.R.Shin, Y.S.Kim, S.G.Paik, O.J.Y H.Lee, J.O.Lee
compound source
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
175.500 194.800 274.400 90.00 93.30 90.00
method X-Ray Diffractionresolution
note 4V46 supersedes 1OTZ, 1P0T
Gene
Ontology
ChainFunctionProcessComponent
AC, AT, AO, AY, Ak, Al, Ax, Am, AB, AU, Ag, AL, Af, AA, AJ, AM, AH, AG, Ac, AP, AI, AQ, AN, Aj, AE, AK, At, A1, Au, Ao, Av, A2, Ae, Ap, An, A8, AD, Ab, As, AZ, AF, A3, AX, Aw, Ah, AS, Ai, AV, A7, Ar, A6, A5, Aq, A4, AR, AW, A0, Ad, A9, Aa


BQ, BC, BB, B6, BN, Ba, BW, B1, Bd, Bu, Bj, BL, Bo, BO, BP, BE, Bs, Bf, BY, Bp, BF, BI, Bn, BT, B7, B3, BA, Bi, BX, Bq, Br, Bt, B4, Bx, Bm, Be, BG, BS, BJ, BZ, BU, Bv, Bl, Bg, Bw, Bk, Bh, B8, B2, Bc, B5, BM, BK, B0, BV, BH, Bb, B9, BR, BD


Primary referenceCrystal structure of the BAFF-BAFF-R complex and its implications for receptor activation., Kim HM, Yu KS, Lee ME, Shin DR, Kim YS, Paik SG, Yoo OJ, Lee H, Lee JO, Nat Struct Biol. 2003 May;10(5):342-8. PMID:12715002
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1374 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 4V46
  • Structure Factors (1971 Kb)
  • Retrieve 4V46 in mmCIF format [Save to disk]
  • View 4V46 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4V46
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 4v46 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4v46_BS] [4v46_Br] [4v46_Ap] [4v46_AJ] [4v46_BH] [4v46_BN] [4v46] [4v46_Bd] [4v46_At] [4v46_BP] [4v46_AX] [4v46_BY] [4v46_Bk] [4v46_AU] [4v46_AY] [4v46_Ax] [4v46_B3] [4v46_B2] [4v46_AC] [4v46_BL] [4v46_Ag] [4v46_Bt] [4v46_BD] [4v46_Af] [4v46_BV] [4v46_Ar] [4v46_AZ] [4v46_A2] [4v46_BC] [4v46_Bi] [4v46_Bg] [4v46_AW] [4v46_B1] [4v46_Bn] [4v46_AB] [4v46_Al] [4v46_B6] [4v46_AE] [4v46_An] [4v46_Bs] [4v46_A4] [4v46_A6] [4v46_Ai] [4v46_A5] [4v46_BA] [4v46_BQ] [4v46_AG] [4v46_Bj] [4v46_Am] [4v46_Bh] [4v46_BW] [4v46_A7] [4v46_AR] [4v46_BI] [4v46_Ab] [4v46_Ak] [4v46_Bb] [4v46_AO] [4v46_AH] [4v46_AM] [4v46_AI] [4v46_Aq] [4v46_Aa] [4v46_Ah] [4v46_BO] [4v46_BJ] [4v46_AD] [4v46_BR] [4v46_BB] [4v46_B5] [4v46_AK] [4v46_AA] [4v46_BM] [4v46_Ba] [4v46_Bw] [4v46_A8] [4v46_A3] [4v46_Bo] [4v46_Ae] [4v46_AF] [4v46_AL] [4v46_BU] [4v46_AV] [4v46_B4] [4v46_B8] [4v46_AQ] [4v46_Bc] [4v46_A9] [4v46_Bu] [4v46_Ao] [4v46_Bl] [4v46_BX] [4v46_Ad] [4v46_BK] [4v46_BT] [4v46_Bp] [4v46_AS] [4v46_BG] [4v46_A0] [4v46_B0] [4v46_B9] [4v46_Bm] [4v46_BF] [4v46_Aw] [4v46_Bf] [4v46_AT] [4v46_Ac] [4v46_A1] [4v46_AP] [4v46_Au] [4v46_B7] [4v46_Aj] [4v46_AN] [4v46_BZ] [4v46_Bv] [4v46_Bq] [4v46_Bx] [4v46_Av] [4v46_Be] [4v46_BE] [4v46_As]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4V46: [TNF ] by SMART
  • Other resources with information on 4V46
  • Community annotation for 4V46 at PDBWiki (http://pdbwiki.org)

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