4V6R	Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)	date
authors	Agirrezabala, X., Liao, H., Schreiner, E., Fu, J., Ortiz-Meoz, R.F., Schulten, K., Green, R., Frank, J.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	11.50
note	4V6R supersedes 3J10, 3J14
Gene Ontology	Chain Function Process Component AE AF AG AH AI AJ AK AL AM AN AO AP AQ AR AS nuclease activity endonuclease activity endodeoxyribonuclease activi... AT AU AV AW ornithine decarboxylase inhi... AX B0 B1 B2 B3 B4 B5 B6 B7 BC BD BE BF BG BH BI BJ BK BL BM BN BO BP BQ BR BS translation repressor activi... BT BU BV BW BX BY BZ
Primary reference	Structural characterization of mRNA-tRNA translocation intermediates., Agirrezabala X, Liao HY, Schreiner E, Fu J, Ortiz-Meoz RF, Schulten K, Green R, Frank J, Proc Natl Acad Sci U S A. 2012 Mar 30. PMID:22467828

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1011 Kb) [Save to disk] CSU: Contacts of Structural Units for 4V6R Retrieve 4V6R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4V6R from S2C, [Save to disk]

View 4V6R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4V6R

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4v6r_BR] [4v6r_AU] [4v6r_B5] [4v6r_BS] [4v6r_BW] [4v6r_BT] [4v6r_B2] [4v6r_AL] [4v6r_BX] [4v6r_BL] [4v6r_AN] [4v6r_AP] [4v6r_BF] [4v6r_AH] [4v6r_AE] [4v6r_AX] [4v6r_AT] [4v6r_AM] [4v6r_AW] [4v6r_AC] [4v6r_B1] [4v6r_BZ] [4v6r_BN] [4v6r_AF] [4v6r_BD] [4v6r] [4v6r_B7] [4v6r_AB] [4v6r_BI] [4v6r_BP] [4v6r_BQ] [4v6r_BE] [4v6r_BB] [4v6r_AS] [4v6r_AD] [4v6r_BC] [4v6r_BK] [4v6r_B6] [4v6r_B0] [4v6r_B3] [4v6r_AK] [4v6r_BO] [4v6r_AJ] [4v6r_BM] [4v6r_AA] [4v6r_AR] [4v6r_BG] [4v6r_BA] [4v6r_BU] [4v6r_BH] [4v6r_AG] [4v6r_AQ] [4v6r_AO] [4v6r_B4] [4v6r_AV] [4v6r_BY] [4v6r_AI] [4v6r_BV] [4v6r_BJ] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4V6R: [KH] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

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Community annotation for 4V6R at PDBWiki (http://pdbwiki.org)

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