4V82 Crystal structure of cyanobacterial Photosystem II in complex with terbutryn date
authors Gabdulkhakov, A., Broser, M., Guskov, A., Kern, J., Glockner, C., Muh, F., Saenger, W., Zouni, A.
compound source
symmetry
R_factor
R_Free 0.299
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.20
note 4V82 supersedes 3PRQ, 3PRR
Gene
Ontology
ChainFunctionProcessComponent
AA, BA


AC, BC


AD, BD


AF, BF


AH, BH


AM, BM


AO, BO


AT, BT


AV, BV


AX, BX


AZ, BZ


Ay, By


BB, AB


BE, AE


BI, AI


BJ, AJ


BK, AK


BL, AL


BU, AU


Primary referenceStructural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn., Broser M, Glockner C, Gabdulkhakov A, Guskov A, Buchta J, Kern J, Muh F, Dau H, Saenger W, Zouni A, J Biol Chem. 2011 May 6;286(18):15964-72. Epub 2011 Mar 2. PMID:21367867
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (988 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 4V82
  • Structure Factors (1291 Kb)
  • Retrieve 4V82 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4V82 from S2C, [Save to disk]
    • View 4V82 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4V82
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4v82_AV] [4v82_BB] [4v82_AB] [4v82_AK] [4v82_AM] [4v82_BD] [4v82_BZ] [4v82_BA] [4v82_AO] [4v82_BM] [4v82_BF] [4v82] [4v82_BO] [4v82_BI] [4v82_AE] [4v82_AZ] [4v82_BT] [4v82_AA] [4v82_AJ] [4v82_BE] [4v82_AC] [4v82_BK] [4v82_Ay] [4v82_BY] [4v82_BX] [4v82_AU] [4v82_BU] [4v82_By] [4v82_AY] [4v82_BJ] [4v82_AH] [4v82_AT] [4v82_AD] [4v82_BC] [4v82_BV] [4v82_AL] [4v82_AI] [4v82_AF] [4v82_BH] [4v82_AX] [4v82_BL]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4V82
  • Community annotation for 4V82 at PDBWiki (http://pdbwiki.org)

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