4V9N Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. date
authors Santos, N., Zhu, J., Donohue, J.P., Korostelev, A.A., Noller, H.F.
compound source
symmetry
R_factor
R_Free 0.2681
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.40
note 4V9N supersedes 4KFH, 4KFI, 4KFK, 4KFL
Gene TT
Gene
Ontology
ChainFunctionProcessComponent
AB, CB


AC, CC


AH, CH


AI, CI


AL, CL


AM, CM


AN, CN


AO, CO


AS, CS


AT, CT


AU, CU


AY, CY


B0, D0


B1, D1


B3, D3


B4, D4


B6, D6


B7, D7


BE, DE


BF, DF


BN, DN


BO, DO


BQ, DQ


BS, DS


BT, DT


BW, DW


BX, DX


BY, DY


CD, AD


CE, AE


CF, AF


CG, AG


CJ, AJ


CK, AK


CP, AP


CQ, AQ


CR, AR


D2, B2


D5, B5


D8, B8


DD, BD


DG, BG


DH, BH


DI, BI


DK, BK


DP, BP


DR, BR


DU, BU


DV, BV


DZ, BZ


Primary referenceCrystal Structure of the 70S Ribosome Bound with the Q253P Mutant Form of Release Factor RF2., Santos N, Zhu J, Donohue JP, Korostelev AA, Noller HF, Structure. 2013 Jun 12. pii: S0969-2126(13)00158-5. doi:, 10.1016/j.str.2013.04.028. PMID:23769667
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2344 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 4V9N
  • Structure Factors (6653 Kb)
  • Retrieve 4V9N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4V9N from S2C, [Save to disk]
  • View 4V9N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4V9N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4v9n_AB] [4v9n_DE] [4v9n_BB] [4v9n_DN] [4v9n_BA] [4v9n_CM] [4v9n_BF] [4v9n_D4] [4v9n_BW] [4v9n_D7] [4v9n_DB] [4v9n_AT] [4v9n_CY] [4v9n_DZ] [4v9n_CF] [4v9n_DY] [4v9n_AU] [4v9n_B0] [4v9n_CP] [4v9n_DO] [4v9n_D2] [4v9n_AI] [4v9n_AO] [4v9n_CN] [4v9n_AH] [4v9n_CI] [4v9n_BD] [4v9n_D5] [4v9n_CS] [4v9n] [4v9n_B2] [4v9n_BN] [4v9n_D0] [4v9n_CT] [4v9n_DU] [4v9n_CH] [4v9n_BT] [4v9n_BK] [4v9n_BG] [4v9n_DV] [4v9n_BH] [4v9n_CD] [4v9n_DT] [4v9n_CL] [4v9n_B7] [4v9n_BZ] [4v9n_B3] [4v9n_CQ] [4v9n_BY] [4v9n_CA] [4v9n_DR] [4v9n_B1] [4v9n_CE] [4v9n_AN] [4v9n_CR] [4v9n_DA] [4v9n_BR] [4v9n_BO] [4v9n_BQ] [4v9n_BV] [4v9n_DD] [4v9n_B4] [4v9n_AA] [4v9n_AY] [4v9n_DK] [4v9n_BS] [4v9n_AP] [4v9n_AL] [4v9n_B6] [4v9n_DI] [4v9n_AG] [4v9n_DH] [4v9n_CG] [4v9n_BX] [4v9n_CW] [4v9n_AS] [4v9n_DW] [4v9n_DG] [4v9n_CV] [4v9n_DS] [4v9n_DF] [4v9n_CJ] [4v9n_CC] [4v9n_DX] [4v9n_DQ] [4v9n_AD] [4v9n_AF] [4v9n_BP] [4v9n_AM] [4v9n_BE] [4v9n_D3] [4v9n_AE] [4v9n_D8] [4v9n_CO] [4v9n_AV] [4v9n_CK] [4v9n_AW] [4v9n_CU] [4v9n_AC] [4v9n_AJ] [4v9n_CB] [4v9n_D6] [4v9n_B8] [4v9n_DP] [4v9n_D1] [4v9n_AK] [4v9n_AQ] [4v9n_B5] [4v9n_BI] [4v9n_AR] [4v9n_BU]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4V9N: [KH] [KOW] [PCRF] [RL11] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART
  • Other resources with information on 4V9N
  • Community annotation for 4V9N at PDBWiki (http://pdbwiki.org)

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