4BBZ Hydrolase date Sep 30, 2012
title Structure Of Human Butyrylcholinesterase Inhibited By Cbdp ( Soak): Cresyl-Phosphoserine Adduct
authors E.Carletti, J.P.Colletier, L.M.Schopfer, G.Santoni, P.Masson, O.Lockridge, F.Nachon, M.Weik
compound source
Molecule: Cholinesterase
Chain: A
Fragment: Catalytic Domain, Residues 29-557
Synonym: Acylcholine Acylhydrolase, Butyrylcholine Esterase Esterase II, Pseudocholinesterase;
Ec: 3.1.1.8
Engineered: Yes
Mutation: Yes
Other_details: Cresyl-Phosphate Adduct On S198
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell_line: Cho-K1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgs
symmetry Space Group: I 4 2 2
R_factor 0.166 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
154.680 154.680 126.990 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand 4OJ, CL, FUL, NAG, SO4, UNX enzyme Hydrolase E.C.3.1.1.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInhibition pathways of the potent organophosphate CBDP with cholinesterases revealed by X-ray crystallographic snapshots and mass spectrometry., Carletti E, Colletier JP, Schopfer LM, Santoni G, Masson P, Lockridge O, Nachon F, Weik M, Chem Res Toxicol. 2013 Jan 22. PMID:23339663
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (188 Kb) [Save to disk]
  • Biological Unit Coordinates (4bbz.pdb1.gz) 180 Kb
  • LPC: Ligand-Protein Contacts for 4BBZ
  • CSU: Contacts of Structural Units for 4BBZ
  • Structure Factors (177 Kb)
  • Retrieve 4BBZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4BBZ from S2C, [Save to disk]
  • Re-refined 4bbz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4BBZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4BBZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4BBZ, from MSDmotif at EBI
  • Fold representative 4bbz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4bbz_A] [4bbz]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4BBZ
  • Community annotation for 4BBZ at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
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