4G8H Hydrolase date Jul 23, 2012
title Crystal Structure Of C-Lobe Of Bovine Lactoferrin Complexed Licofelone At 1.88 A Resolution
authors P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh
compound source
Molecule: Lactotransferrin
Chain: A
Fragment: C-Lobe, Unp Residues 361-705
Synonym: Lactoferrin, Lactoferricin-B, Lfcin-B
Ec: 3.4.21.-
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
symmetry Space Group: P 1 21 1
R_factor 0.164 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.677 49.945 65.558 90.00 107.13 90.00
method X-Ray Diffractionresolution 1.88 Å
ligand CO3, FE, LCF, NAG, SO4, ZN enzyme Hydrolase E.C.3.4.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (4g8h.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 4G8H
  • CSU: Contacts of Structural Units for 4G8H
  • Structure Factors (1065 Kb)
  • Retrieve 4G8H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4G8H from S2C, [Save to disk]
  • Re-refined 4g8h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4G8H in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4G8H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4G8H, from MSDmotif at EBI
  • Fold representative 4g8h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4g8h_A] [4g8h]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4G8H: [TR_FER ] by SMART
  • Other resources with information on 4G8H
  • Community annotation for 4G8H at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
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