4I9B	Structure of aminoaldehyde dehydrogenase 1 from Solanum lycopersium (SlAMADH1) with a thiohemiacetal intermediate	date	2012-12-05
authors	Morera, S., Vigouroux, A., Kopecny, D.
compound		source
symmetry		R_factor R_Free 0.2119
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.90
ligand	1KA, EDO, NA, NAD, PEG	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate., Kopecny D, Koncitikova R, Tylichova M, Vigouroux A, Moskalikova H, Soural M, Sebela M, Morera S, J Biol Chem. 2013 Mar 29;288(13):9491-507. doi: 10.1074/jbc.M112.443952. Epub, 2013 Feb 13. PMID:23408433

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (175 Kb) [Save to disk] Biological Unit Coordinates (4i9b.pdb1.gz) 169 Kb LPC: Ligand-Protein Contacts for 4I9B CSU: Contacts of Structural Units for 4I9B Structure Factors (425 Kb) Retrieve 4I9B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4I9B from S2C, [Save to disk] Re-refined 4i9b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4I9B in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4I9B

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 4I9B, from MSDmotif at EBI Fold representative 4i9b from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4i9b_B] [4i9b_A] [4i9b] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4I9B

Community annotation for 4I9B at PDBWiki (http://pdbwiki.org)

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