4JVA Crystal Structure of RIIbeta(108-402) bound to HE33, a N6 di-propyl substituted cAMP analog date 2013-03-25
authors Brown, S.H.J., Cheng, C.Y., Saldanha, A.S., Wu, J., Cottam, H., Sankaran, B., Taylor, S.S.
compound source
R_Free 0.2782
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 1OR enzyme

Primary referenceImplementing Fluorescence Anisotropy Screening and Crystallographic Analysis to Define PKA Isoform-Selective Activation by cAMP Analogs., Brown SH, Cheng CY, Saldanha SA, Wu J, Cottam HB, Sankaran B, Taylor SS, ACS Chem Biol. 2013 Sep 10. PMID:23978166
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (4jva.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 4JVA
  • CSU: Contacts of Structural Units for 4JVA
  • Structure Factors (151 Kb)
  • Retrieve 4JVA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4JVA from S2C, [Save to disk]
  • Re-refined 4jva structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4JVA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4JVA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4JVA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4jva] [4jva_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4JVA: [cNMP ] by SMART
  • Other resources with information on 4JVA
  • Community annotation for 4JVA at PDBWiki (http://pdbwiki.org)

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