5LZW Ribosome date 6-1 20, 2000
authors S.Shao, J.Murray, A.Brown, J.Taunton, V.Ramakrishnan, R.S.He
compound source
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
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KK, ZZ


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ii
  • nuclease activity
  • endonuclease activity


  • j


    jj


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    t


    Primary referenceDecoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes., Shao S, Murray J, Brown A, Taunton J, Ramakrishnan V, Hegde RS, Cell. 2016 Nov 17;167(5):1229-1240.e15. doi: 10.1016/j.cell.2016.10.046. PMID:27863242
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1176 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 5LZW
  • Retrieve 5LZW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LZW from S2C, [Save to disk]
  • View 5LZW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5LZW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lzw_gg] [5lzw_DD] [5lzw_W] [5lzw_h] [5lzw_m] [5lzw_p] [5lzw_NN] [5lzw_1] [5lzw_3] [5lzw_EE] [5lzw_KK] [5lzw_Y] [5lzw_BB] [5lzw_X] [5lzw_r] [5lzw_dd] [5lzw_cc] [5lzw_o] [5lzw_J] [5lzw_HH] [5lzw_g] [5lzw] [5lzw_H] [5lzw_8] [5lzw_JJ] [5lzw_QQ] [5lzw_L] [5lzw_Z] [5lzw_LL] [5lzw_I] [5lzw_T] [5lzw_aa] [5lzw_ZZ] [5lzw_B] [5lzw_CC] [5lzw_P] [5lzw_E] [5lzw_bb] [5lzw_jj] [5lzw_Q] [5lzw_l] [5lzw_j] [5lzw_k] [5lzw_ii] [5lzw_i] [5lzw_ee] [5lzw_n] [5lzw_R] [5lzw_OO] [5lzw_b] [5lzw_5] [5lzw_2] [5lzw_f] [5lzw_VV] [5lzw_F] [5lzw_a] [5lzw_YY] [5lzw_S] [5lzw_d] [5lzw_A] [5lzw_II] [5lzw_TT] [5lzw_ff] [5lzw_FF] [5lzw_c] [5lzw_XX] [5lzw_WW] [5lzw_MM] [5lzw_O] [5lzw_GG] [5lzw_D] [5lzw_UU] [5lzw_V] [5lzw_9] [5lzw_M] [5lzw_U] [5lzw_SS] [5lzw_hh] [5lzw_e] [5lzw_s] [5lzw_PP] [5lzw_RR] [5lzw_G] [5lzw_t] [5lzw_7] [5lzw_C] [5lzw_N] [5lzw_AA]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 5LZW: [KH] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L15e] [Ribosomal_L19e] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_L31e] [Ribosomal_L32e] [Ribosomal_L40e] [Ribosomal_S10] [Ribosomal_S13_N] [Ribosomal_S15] [Ribosomal_S19e] [Ribosomal_S27] [Ribosomal_S3Ae] [Ribosomal_S4] [Ribosomal_S6e] [S4] [TRASH] [UBQ] [WD40] [eRF1_1 ] by SMART
  • Other resources with information on 5LZW
  • Community annotation for 5LZW at PDBWiki (http://pdbwiki.org)

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