5MI9 Hydrolase date Nov 27, 2016
title Structure Of The Phosphomimetic Mutant Of The Elongation Fac T62e
authors A.Talavera, J.Hendrix, W.Versees, S.De Gieter, D.Castro-Roa, D.Ju K.Van Nerom, N.Vandenberk, A.Barth, H.De Greve, J.Hofkens, N.Zen R.Loris, A.Garcia-Pino
compound source
Molecule: Elongation Factor Tu 1
Chain: A, B
Synonym: Ef-Tu 1
Engineered: Yes
 Organism_scientific: Escherichia Coli O9:H4 (Strain Hs)
Organism_taxid: 331112
Strain: Hs
Gene: Tuf1, Echs_a3535
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 De3
symmetry Space Group: P 1
R_factor 0.226 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.120 62.100 65.470 109.25 106.00 88.15
method X-Ray Diffractionresolution 3.30 Å
ligand GDP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (230 Kb) [Save to disk]
  • Biological Unit Coordinates (5mi9.pdb1.gz) 115 Kb
  • Biological Unit Coordinates (5mi9.pdb2.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 5MI9
  • CSU: Contacts of Structural Units for 5MI9
  • Structure Factors (406 Kb)
  • Retrieve 5MI9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MI9 from S2C, [Save to disk]
    • View 5MI9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5MI9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mi9_B] [5mi9_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5MI9
  • Community annotation for 5MI9 at PDBWiki (http://pdbwiki.org)

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