5MPC Hydrolase date 6-1 20, 1999
authors M.Wehmer, T.Rudack, F.Beck, A.Aufderheide, G.Pfeifer, J.M.Pl F.Foerster, K.Schulten, W.Baumeister, E.Sakata
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
1, h

  • proteasome core complex, bet...
  • 2, i

  • proteasome core complex, bet...
  • 6, m


    7, n

  • proteasome core complex, bet...
  • 8


    B, b

  • proteasome core complex, alp...
  • E, e

  • proteasome core complex, alp...
  • F, f

  • proteasome core complex, alp...
  • H
  • proteasome-activating ATPase...


  • I
  • proteasome-activating ATPase...


  • J


    K
  • proteasome-activating ATPase...


  • L


    M


    N
  • enzyme regulator activity


  • O


    P


    Q


    R
  • enzyme regulator activity


  • S
  • enzyme regulator activity


  • T


    U


    V
  • Lys63-specific deubiquitinas...


  • W


    X
  • endopeptidase activator acti...


  • Y


    Z
  • enzyme regulator activity


  • a, A

  • proteasome core complex, alp...
  • c, C

  • proteasome core complex, alp...
  • d, D


    g, G

  • proteasome core complex, alp...
  • j, 3
  • endopeptidase activator acti...

  • proteasome core complex, bet...
  • k, 4
  • endopeptidase activator acti...

  • proteasome core complex, bet...
  • l, 5

  • proteasome core complex, bet...
  • Primary referenceStructural insights into the functional cycle of the ATPase module of the 26S proteasome., Wehmer M, Rudack T, Beck F, Aufderheide A, Pfeifer G, Plitzko JM, Forster F, Schulten K, Baumeister W, Sakata E, Proc Natl Acad Sci U S A. 2017 Feb 7;114(6):1305-1310. doi:, 10.1073/pnas.1621129114. Epub 2017 Jan 23. PMID:28115689
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1628 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 5MPC
  • Retrieve 5MPC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MPC from S2C, [Save to disk]
  • View 5MPC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5MPC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mpc_g] [5mpc_n] [5mpc_7] [5mpc_m] [5mpc_a] [5mpc_4] [5mpc_B] [5mpc_Z] [5mpc_K] [5mpc_Q] [5mpc_L] [5mpc_T] [5mpc_U] [5mpc_W] [5mpc_i] [5mpc_M] [5mpc_P] [5mpc_I] [5mpc_d] [5mpc_S] [5mpc_1] [5mpc_c] [5mpc_A] [5mpc_5] [5mpc_H] [5mpc_Y] [5mpc] [5mpc_h] [5mpc_l] [5mpc_E] [5mpc_j] [5mpc_J] [5mpc_R] [5mpc_b] [5mpc_k] [5mpc_V] [5mpc_O] [5mpc_6] [5mpc_D] [5mpc_f] [5mpc_G] [5mpc_N] [5mpc_X] [5mpc_8] [5mpc_3] [5mpc_2] [5mpc_F] [5mpc_C] [5mpc_e]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5MPC
  • Community annotation for 5MPC at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science