5T2C Ribosome date 6-0 20, 1998
authors X.Zhang, M.Lai, Z.H.Zhou
compound source
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A0

  • small ribosomal subunit
  • cytosolic small ribosomal su...
  • AB

  • cytosolic small ribosomal su...
  • AC

  • cytosolic small ribosomal su...
  • AD

  • cytosolic small ribosomal su...
  • AE

  • small ribosomal subunit
  • cytosolic small ribosomal su...
  • AF

  • small ribosomal subunit
  • cytosolic small ribosomal su...
  • AG

  • small ribosomal subunit
  • cytosolic small ribosomal su...
  • AH
  • intracellular transport of v...
  • endoplasmic reticulum mannos...
  • small ribosomal subunit
  • cytosolic small ribosomal su...
  • AI
  • protein tyrosine kinase inhi...


  • AJ

  • cytosolic small ribosomal su...
  • AK

  • cytosolic small ribosomal su...
  • AL

  • cytosolic small ribosomal su...
  • AM

  • cytosolic small ribosomal su...
  • AN

  • cytosolic small ribosomal su...
  • AO
  • translation regulator activi...

  • cytosolic small ribosomal su...
  • AP

  • cytosolic small ribosomal su...
  • AQ

  • small ribosomal subunit
  • cytosolic small ribosomal su...
  • AR

  • small ribosomal subunit
  • cytosolic small ribosomal su...
  • AT

  • small ribosomal subunit
  • cytosolic small ribosomal su...
  • AU

  • cytosolic small ribosomal su...
  • AV

  • cytosolic small ribosomal su...
  • Ao
  • virus receptor activity

  • cytosolic small ribosomal su...
  • Ap

  • cytosolic small ribosomal su...
  • Aq

  • cytosolic small ribosomal su...
  • Ar

  • ribosome
  • cytosolic small ribosomal su...
  • As

  • cytosolic small ribosomal su...
  • At

  • cytosolic small ribosomal su...
  • Au

  • cytosolic small ribosomal su...
  • Av

  • cytosolic small ribosomal su...
  • Aw

  • cytosolic small ribosomal su...
  • Ax

  • cytosolic small ribosomal su...
  • Ay

  • cytosolic small ribosomal su...
  • Az

  • cytosolic small ribosomal su...
  • D


    E


    F


    G


    H


    I


    J


    K


    L


    M


    N


    O


    P


    Q


    R


    S


    T


    U


    V


    W


    X


    Y


    Z


    a


    b


    c


    d


    e


    f


    g
  • intracellular transport of v...
  • endoplasmic reticulum mannos...

  • i

  • cytosolic large ribosomal su...
  • j


    k


    l


    m


    n


    o


    p


    q


    r


    s


    t


    Primary referenceStructures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes., Zhang X, Lai M, Chang W, Yu I, Ding K, Mrazek J, Ng HL, Yang OO, Maslov DA, Zhou ZH, Nat Commun. 2016 Oct 18;7:13223. doi: 10.1038/ncomms13223. PMID:27752045
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (970 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 5T2C
  • Retrieve 5T2C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5T2C from S2C, [Save to disk]
  • View 5T2C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5T2C
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5t2c from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5t2c_AD] [5t2c_c] [5t2c_AE] [5t2c_AF] [5t2c_R] [5t2c_Ax] [5t2c_At] [5t2c_h] [5t2c_X] [5t2c_AT] [5t2c_Y] [5t2c_AQ] [5t2c_O] [5t2c_Ap] [5t2c_o] [5t2c_Av] [5t2c_i] [5t2c_G] [5t2c_An] [5t2c_AG] [5t2c_P] [5t2c_C] [5t2c_AH] [5t2c_Q] [5t2c_e] [5t2c_I] [5t2c_E] [5t2c_t] [5t2c_AJ] [5t2c_V] [5t2c_j] [5t2c_a] [5t2c_Au] [5t2c_q] [5t2c_s] [5t2c_g] [5t2c_Aw] [5t2c_F] [5t2c_AK] [5t2c_T] [5t2c_B] [5t2c_n] [5t2c_f] [5t2c_U] [5t2c_AC] [5t2c_AL] [5t2c_N] [5t2c_M] [5t2c_AV] [5t2c_AA] [5t2c_Ar] [5t2c_Ao] [5t2c_r] [5t2c_A0] [5t2c_b] [5t2c_Ay] [5t2c_L] [5t2c_W] [5t2c_AN] [5t2c_d] [5t2c_Az] [5t2c_Aq] [5t2c_AP] [5t2c_k] [5t2c_K] [5t2c_AB] [5t2c_AM] [5t2c_As] [5t2c_AR] [5t2c_AI] [5t2c_H] [5t2c_Z] [5t2c_p] [5t2c_m] [5t2c_AU] [5t2c_A] [5t2c_S] [5t2c_l] [5t2c_J] [5t2c_AO] [5t2c] [5t2c_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5T2C
  • Community annotation for 5T2C at PDBWiki (http://pdbwiki.org)

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