5U4I Ribosome date 6-1 20, 2000
authors F.Zeng, Y.Chen, J.Remis, M.Shekhar, J.C.Phillips, E.Tajkhors H.Jin
compound source
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
458.112 458.112 458.112 90.00 90.00 90.00
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
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  • translation repressor activi...


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  • mRNA binding involved in pos...


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  • nuclease activity
  • endonuclease activity
  • endodeoxyribonuclease activi...


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  • ornithine decarboxylase inhi...


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    Primary referenceStructural basis of co-translational quality control by ArfA and RF2 bound to ribosome., Zeng F, Chen Y, Remis J, Shekhar M, Phillips JC, Tajkhorshid E, Jin H, Nature. 2017 Jan 11. doi: 10.1038/nature21053. PMID:28077875
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1790 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 5U4I
  • Retrieve 5U4I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5U4I from S2C, [Save to disk]
    • View 5U4I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5U4I
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5u4i_O] [5u4i_w] [5u4i_g] [5u4i_3] [5u4i_r] [5u4i_p] [5u4i_y] [5u4i_U] [5u4i_e] [5u4i_m] [5u4i_W] [5u4i_4] [5u4i_G] [5u4i_L] [5u4i_d] [5u4i_i] [5u4i_n] [5u4i_f] [5u4i_R] [5u4i_2] [5u4i_z] [5u4i_H] [5u4i_s] [5u4i_x] [5u4i_q] [5u4i_5] [5u4i_Q] [5u4i_T] [5u4i_1] [5u4i_S] [5u4i_J] [5u4i_D] [5u4i_E] [5u4i_h] [5u4i_X] [5u4i_t] [5u4i_a] [5u4i_A] [5u4i_P] [5u4i_K] [5u4i_N] [5u4i_v] [5u4i_o] [5u4i_C] [5u4i_Y] [5u4i_j] [5u4i_B] [5u4i_b] [5u4i_c] [5u4i_u] [5u4i_M] [5u4i_k] [5u4i_V] [5u4i] [5u4i_Z] [5u4i_F] [5u4i_l] [5u4i_0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5U4I
  • Community annotation for 5U4I at PDBWiki (http://pdbwiki.org)

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