5LQV Lipid Transport date Aug 17, 2016
title Spatial Structure Of The Lentil Lipid Transfer Protein In Co Anionic Lysolipid Lppg
authors K.S.Mineev, Z.O.Shenkarev, A.S.Arseniev, D.N.Melnikova, E.I.Fink T.V.Ovchinnikova
compound source
Molecule: Non-Specific Lipid-Transfer Protein 2
Chain: A
Synonym: Ltp2
Engineered: Yes
 Organism_scientific: Lens Culinaris
Organism_common: Lentil
Organism_taxid: 3864
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
ligand PGM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceLigand Binding Properties of the Lentil Lipid Transfer Protein: Molecular Insight into the Possible Mechanism of Lipid Uptake., Shenkarev ZO, Melnikova DN, Finkina EI, Sukhanov SV, Boldyrev IA, Gizatullina AK, Mineev KS, Arseniev AS, Ovchinnikova TV, Biochemistry. 2017 Mar 28;56(12):1785-1796. doi: 10.1021/acs.biochem.6b01079., Epub 2017 Mar 16. PMID:28266846
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (537 Kb) [Save to disk]
  • Biological Unit Coordinates (5lqv.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 5LQV
  • CSU: Contacts of Structural Units for 5LQV
  • Original NMR restraints for 5LQV from PDB
  • Retrieve 5LQV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LQV from S2C, [Save to disk]
    • View 5LQV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5LQV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lqv_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5LQV
  • Community annotation for 5LQV at PDBWiki (http://pdbwiki.org)

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