6GQM	Signaling Protein	date	Jun 07, 2018
title	Crystal Structure Of Human C-Kit Kinase Domain In Complex Wi Molecule Inhibitor, Azd3229
authors	M.Schimpl, C.J.Hardy, D.J.Ogg, R.C.Overman, M.J.Packer, J.G.Kettl R.Anjum, E.Barry, D.Bhavsar, C.Brown, A.Campbell, K.Goldberg, M.G S.Guichard, T.Hunt, O.Jones, X.Li, O.Moleva, S.Pearson, W.Shao, A. J.Smith, D.Stead, S.Stokes, M.Tucker, Y.Ye
compound		source
Molecule: Maststem Cell Growth Factor Receptor Kit Chain: A, B Synonym: Scfr,Piebald Trait Protein,Pbt,Proto-Oncogene C-Ki Tyrosine-Protein Kinase Kit,P145 C-Kit,V-Kit Hardy-Zuckerma Sarcoma Viral Oncogene Homolog; Ec: 2.7.10.1 Engineered: Yes Mutation: Yes Other_details: Human C-Kit Kinase Domain (P551-H934) Bearin Mutations To Optimise Protein Expression (I563s, V569s, Y60 M651e, I662h, D768h, R804n, V825d, C844s, L890s, H894y, L91 L923d), And The Kinase Insert Domain(S688-D765) Deleted And With The Sequence Efvpykvapedlykdflt		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Kit, Scfr Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Star
symmetry	Space Group: P 21 21 21	R_factor 0.203 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.970 90.180 91.150 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	CL, F8H	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Discovery of N-{4-[(6,7-dimethoxyquinazolin-4-yl)oxy]phenyl}-2-[4-(propan-2-yl)-1H-1,2,3-triaz ol-1-yl]acetamide (AZD3229), a potent pan-KIT mutant inhibitor for the treatment of gastrointestinal stromal tumors., Kettle JG, Anjum R, Barry E, Bhavsar D, Brown C, Boyd S, Campbell A, Goldberg K, Grondine M, Guichard S, Hardy C, Hunt T, Jones R, Li X, Moleva O, Ogg D, Overman R, Packer MJ, Pearson S, Schimpl M, Shao W, Smith A, Smith J, Stead D, Stokes S, Tucker M, Ye Y, J Med Chem. 2018 Sep 11. doi: 10.1021/acs.jmedchem.8b00938. PMID:30204441

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (208 Kb) [Save to disk] Biological Unit Coordinates (6gqm.pdb1.gz) 104 Kb Biological Unit Coordinates (6gqm.pdb2.gz) 101 Kb LPC: Ligand-Protein Contacts for 6GQM CSU: Contacts of Structural Units for 6GQM Structure Factors (1536 Kb) Retrieve 6GQM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6GQM from S2C, [Save to disk]

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Structure-derived information

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Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6gqm_A] [6gqm_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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