6GZZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B3, B4


C1, C2


C4, C3


D2, D1


D3, D4


E2, E1


E3, E4


F2, F1


F3, F4


G1, G2


G3, G4


H1, H2


H3, H4


I1, I2


I4, I3


J2, J1


J3, J4


K2, K1


K3, K4


L1, L2


L4, L3


M1, M2


M3, M4


N2, N1


N3, N4


O1, O2


O4, O3


P2, P1


P3, P4


Q2, Q1


Q3, Q4


R1, R2


R3, R4


S1, S2


S3, S4


T1, T2


T4, T3


U1, U2


U3, U4


V1, V2


V4, V3


W1, W2


X1, X2


Y1, Y2


Z2, Z1


a2, a1


b1, b2


c1, c2


d2, d1


e2, e1


Primary referenceCryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism., Flygaard RK, Boegholm N, Yusupov M, Jenner LB, Nat Commun. 2018 Oct 9;9(1):4179. doi: 10.1038/s41467-018-06724-x. PMID:30301898
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] () [Save to disk]
  • CSU: Contacts of Structural Units for 6GZZ
  • Retrieve 6GZZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GZZ from S2C, [Save to disk]
  • View 6GZZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6GZZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gzz_R3] [6gzz_Z1] [6gzz_d2] [6gzz_a2] [6gzz_Q4] [6gzz_P4] [6gzz_c1] [6gzz_B1] [6gzz_F2] [6gzz_Q2] [6gzz_C1] [6gzz_E3] [6gzz_b2] [6gzz_U3] [6gzz_N4] [6gzz_P2] [6gzz_D3] [6gzz_B3] [6gzz_S4] [6gzz_G1] [6gzz_M4] [6gzz_D2] [6gzz_N2] [6gzz_L3] [6gzz_I4] [6gzz_P3] [6gzz_U2] [6gzz_K4] [6gzz_S2] [6gzz_T3] [6gzz_H2] [6gzz_C4] [6gzz_W4] [6gzz_R4] [6gzz_B4] [6gzz_L4] [6gzz_G2] [6gzz_T1] [6gzz_R2] [6gzz_A2] [6gzz_B2] [6gzz_K1] [6gzz_N3] [6gzz_J3] [6gzz_E1] [6gzz_D4] [6gzz_M3] [6gzz_e2] [6gzz_C3] [6gzz_S3] [6gzz_I3] [6gzz_F3] [6gzz_H4] [6gzz_I1] [6gzz_M1] [6gzz_Q1] [6gzz_Q3] [6gzz_T4] [6gzz_U1] [6gzz_V4] [6gzz_O1] [6gzz_E4] [6gzz_b1] [6gzz_F1] [6gzz_L1] [6gzz_O3] [6gzz_G4] [6gzz_A3] [6gzz_e1] [6gzz_I2] [6gzz_J4] [6gzz_D1] [6gzz_H1] [6gzz_H3] [6gzz_U4] [6gzz_a1] [6gzz_F4] [6gzz_c2] [6gzz_P1] [6gzz_C2] [6gzz_V3] [6gzz_W2] [6gzz_V1] [6gzz_T2] [6gzz_S1] [6gzz_O4] [6gzz_A1] [6gzz_X3] [6gzz_A4] [6gzz_X1] [6gzz_V2] [6gzz_M2] [6gzz_K2] [6gzz_K3] [6gzz_R1] [6gzz_Z2] [6gzz_O2] [6gzz_L2] [6gzz_J1] [6gzz_d1] [6gzz_X2] [6gzz_E2] [6gzz_J2] [6gzz_W1] [6gzz_Y1] [6gzz_Y2] [6gzz_N1] [6gzz_G3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6GZZ
  • Community annotation for 6GZZ at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science