data_1D41
# 
_entry.id   1D41 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.389 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1D41         pdb_00001d41 10.2210/pdb1d41/pdb 
RCSB  ZDFB24       ?            ?                   
WWPDB D_1000172646 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1992-04-15 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2024-02-07 
5 'Structure model' 1 4 2024-04-03 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
6 5 'Structure model' 'Refinement description'    
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' chem_comp_atom                
2 4 'Structure model' chem_comp_bond                
3 4 'Structure model' database_2                    
4 4 'Structure model' pdbx_struct_conn_angle        
5 4 'Structure model' struct_conn                   
6 4 'Structure model' struct_conn_type              
7 4 'Structure model' struct_site                   
8 5 'Structure model' pdbx_initial_refinement_model 
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_database_2.pdbx_DOI'                        
2  4 'Structure model' '_database_2.pdbx_database_accession'         
3  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'  
4  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
5  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
6  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
7  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
8  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
9  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'   
11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 
12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'  
13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
15 4 'Structure model' '_pdbx_struct_conn_angle.value'               
16 4 'Structure model' '_struct_conn.conn_type_id'                   
17 4 'Structure model' '_struct_conn.id'                             
18 4 'Structure model' '_struct_conn.pdbx_dist_value'                
19 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'         
20 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'             
21 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
22 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
23 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
24 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
25 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
26 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
27 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'             
28 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
29 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
30 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
31 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
32 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
33 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'             
34 4 'Structure model' '_struct_conn_type.id'                        
35 4 'Structure model' '_struct_site.pdbx_auth_asym_id'              
36 4 'Structure model' '_struct_site.pdbx_auth_comp_id'              
37 4 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1D41 
_pdbx_database_status.recvd_initial_deposition_date   1991-05-07 
_pdbx_database_status.deposit_site                    BNL 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Zhou, G.' 1 
'Ho, P.S.' 2 
# 
_citation.id                        primary 
_citation.title                     
'Stabilization of Z-DNA by demethylation of thymine bases: 1.3-A single-crystal structure of d(m5CGUAm5CG).' 
_citation.journal_abbrev            Biochemistry 
_citation.journal_volume            29 
_citation.page_first                7229 
_citation.page_last                 7236 
_citation.year                      1990 
_citation.journal_id_ASTM           BICHAW 
_citation.country                   US 
_citation.journal_id_ISSN           0006-2960 
_citation.journal_id_CSD            0033 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   2207101 
_citation.pdbx_database_id_DOI      10.1021/bi00483a010 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Zhou, G.W.' 1 ? 
primary 'Ho, P.S.'   2 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 
;DNA (5'-D(*(5CM)P*GP*UP*AP*(5CM)P*G)-3')
;
1823.245 2  ? ? ? ? 
2 non-polymer syn 'MAGNESIUM ION'                            24.305   2  ? ? ? ? 
3 water       nat water                                      18.015   60 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(5CM)(DG)(DU)(DA)(5CM)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CGUACG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'MAGNESIUM ION' MG  
3 water           HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1 5CM n 
1 2 DG  n 
1 3 DU  n 
1 4 DA  n 
1 5 5CM n 
1 6 DG  n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"          ? 'C10 H14 N5 O6 P' 331.222 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"          ? 'C10 H14 N5 O7 P' 347.221 
DU  'DNA linking' y "2'-DEOXYURIDINE-5'-MONOPHOSPHATE"            ? 'C9 H13 N2 O8 P'  308.182 
HOH non-polymer   . WATER                                         ? 'H2 O'            18.015  
MG  non-polymer   . 'MAGNESIUM ION'                               ? 'Mg 2'            24.305  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1 5CM 1 1  1  5CM +C A . n 
A 1 2 DG  2 2  2  DG  G  A . n 
A 1 3 DU  3 3  3  DU  U  A . n 
A 1 4 DA  4 4  4  DA  A  A . n 
A 1 5 5CM 5 5  5  5CM +C A . n 
A 1 6 DG  6 6  6  DG  G  A . n 
B 1 1 5CM 1 7  7  5CM +C B . n 
B 1 2 DG  2 8  8  DG  G  B . n 
B 1 3 DU  3 9  9  DU  U  B . n 
B 1 4 DA  4 10 10 DA  A  B . n 
B 1 5 5CM 5 11 11 5CM +C B . n 
B 1 6 DG  6 12 12 DG  G  B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 MG  1  13 13 MG  MO5 B . 
D 2 MG  1  14 14 MG  MO6 B . 
E 3 HOH 1  16 16 HOH HOH A . 
E 3 HOH 2  17 17 HOH HOH A . 
E 3 HOH 3  18 18 HOH HOH A . 
E 3 HOH 4  19 19 HOH HOH A . 
E 3 HOH 5  20 20 HOH HOH A . 
E 3 HOH 6  21 21 HOH HOH A . 
E 3 HOH 7  24 24 HOH HOH A . 
E 3 HOH 8  26 26 HOH HOH A . 
E 3 HOH 9  27 27 HOH HOH A . 
E 3 HOH 10 29 29 HOH HOH A . 
E 3 HOH 11 33 33 HOH HOH A . 
E 3 HOH 12 34 34 HOH HOH A . 
E 3 HOH 13 36 36 HOH HOH A . 
E 3 HOH 14 37 37 HOH HOH A . 
E 3 HOH 15 38 38 HOH HOH A . 
E 3 HOH 16 39 39 HOH HOH A . 
E 3 HOH 17 40 40 HOH HOH A . 
E 3 HOH 18 41 41 HOH HOH A . 
E 3 HOH 19 44 44 HOH HOH A . 
E 3 HOH 20 46 46 HOH HOH A . 
E 3 HOH 21 48 48 HOH HOH A . 
E 3 HOH 22 49 49 HOH HOH A . 
E 3 HOH 23 51 51 HOH HOH A . 
E 3 HOH 24 52 52 HOH HOH A . 
E 3 HOH 25 53 53 HOH HOH A . 
E 3 HOH 26 54 54 HOH HOH A . 
E 3 HOH 27 55 55 HOH HOH A . 
E 3 HOH 28 58 58 HOH HOH A . 
E 3 HOH 29 63 63 HOH HOH A . 
E 3 HOH 30 69 14 HOH MO6 A . 
E 3 HOH 31 71 14 HOH MO6 A . 
E 3 HOH 32 72 14 HOH MO6 A . 
E 3 HOH 33 73 14 HOH MO6 A . 
E 3 HOH 34 74 14 HOH MO6 A . 
F 3 HOH 1  15 15 HOH HOH B . 
F 3 HOH 2  22 22 HOH HOH B . 
F 3 HOH 3  23 23 HOH HOH B . 
F 3 HOH 4  25 25 HOH HOH B . 
F 3 HOH 5  28 28 HOH HOH B . 
F 3 HOH 6  30 30 HOH HOH B . 
F 3 HOH 7  31 31 HOH HOH B . 
F 3 HOH 8  32 32 HOH HOH B . 
F 3 HOH 9  35 35 HOH HOH B . 
F 3 HOH 10 42 42 HOH HOH B . 
F 3 HOH 11 43 43 HOH HOH B . 
F 3 HOH 12 45 45 HOH HOH B . 
F 3 HOH 13 47 47 HOH HOH B . 
F 3 HOH 14 50 50 HOH HOH B . 
F 3 HOH 15 56 56 HOH HOH B . 
F 3 HOH 16 57 57 HOH HOH B . 
F 3 HOH 17 59 59 HOH HOH B . 
F 3 HOH 18 60 60 HOH HOH B . 
F 3 HOH 19 61 61 HOH HOH B . 
F 3 HOH 20 62 62 HOH HOH B . 
F 3 HOH 21 64 13 HOH MO5 B . 
F 3 HOH 22 65 13 HOH MO5 B . 
F 3 HOH 23 66 13 HOH MO5 B . 
F 3 HOH 24 67 13 HOH MO5 B . 
F 3 HOH 25 68 13 HOH MO5 B . 
F 3 HOH 26 70 14 HOH MO6 B . 
# 
_software.name             NUCLSQ 
_software.classification   refinement 
_software.version          . 
_software.citation_id      ? 
_software.pdbx_ordinal     1 
# 
_cell.entry_id           1D41 
_cell.length_a           17.820 
_cell.length_b           30.440 
_cell.length_c           44.520 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1D41 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                19 
# 
_exptl.entry_id          1D41 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   ? 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      1.66 
_exptl_crystal.density_percent_sol   25.71 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION' 
_exptl_crystal_grow.temp            ? 
_exptl_crystal_grow.temp_details    'ROOM TEMPERATURE' 
_exptl_crystal_grow.pH              7.00 
_exptl_crystal_grow.pdbx_details    'pH 7.00, VAPOR DIFFUSION' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 WATER           ? ? ? 
1 2 1 MPD             ? ? ? 
1 3 1 'NA CACODYLATE' ? ? ? 
1 4 1 MGCL2           ? ? ? 
1 5 2 WATER           ? ? ? 
1 6 2 MPD             ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           ? 
_diffrn.ambient_temp_details   'ROOM TEMPERATURE' 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'IMAGE PLATE' 
_diffrn_detector.type                   RIGAKU 
_diffrn_detector.pdbx_collection_date   ? 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      ? 
_diffrn_source.type                        ? 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     1D41 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   2.000 
_reflns.d_resolution_low             ? 
_reflns.d_resolution_high            1.300 
_reflns.number_obs                   2870 
_reflns.number_all                   3869 
_reflns.percent_possible_obs         ? 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_refine.entry_id                                 1D41 
_refine.ls_number_reflns_obs                     2870 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             ? 
_refine.ls_d_res_high                            1.300 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          0.208 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      
'ZDFB06 IN WHICH THE METHYL GROUPS OF THE THYMINE BASES WERE REMOVED FROM THE C5 POSITIONS.' 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   238 
_refine_hist.pdbx_number_atoms_ligand         17 
_refine_hist.number_atoms_solvent             49 
_refine_hist.number_atoms_total               304 
_refine_hist.d_res_high                       1.300 
_refine_hist.d_res_low                        . 
# 
_database_PDB_matrix.entry_id          1D41 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  1D41 
_struct.title                     
'STABILIZATION OF Z-DNA BY DEMETHYLATION OF THYMINE BASES: 1.3 ANGSTROMS SINGLE-CRYSTAL STRUCTURE OF D(M5CGUAM5CG)' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1D41 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'Z-DNA, DOUBLE HELIX, MODIFIED, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 2 ? 
E N N 3 ? 
F N N 3 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1D41 
_struct_ref.pdbx_db_accession          1D41 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1D41 A 1 ? 6 ? 1D41 1 ? 6  ? 1 6  
2 1 1D41 B 1 ? 6 ? 1D41 7 ? 12 ? 7 12 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id   1 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A 5CM 1 "O3'" ? ? ? 1_555 A DG  2 P  ? ? A 5CM 1  A DG  2  1_555 ? ? ? ? ? ? ?            1.643 ? ? 
covale2  covale both ? A DA  4 "O3'" ? ? ? 1_555 A 5CM 5 P  ? ? A DA  4  A 5CM 5  1_555 ? ? ? ? ? ? ?            1.615 ? ? 
covale3  covale both ? A 5CM 5 "O3'" ? ? ? 1_555 A DG  6 P  ? ? A 5CM 5  A DG  6  1_555 ? ? ? ? ? ? ?            1.616 ? ? 
covale4  covale both ? B 5CM 1 "O3'" ? ? ? 1_555 B DG  2 P  ? ? B 5CM 7  B DG  8  1_555 ? ? ? ? ? ? ?            1.523 ? ? 
covale5  covale both ? B DA  4 "O3'" ? ? ? 1_555 B 5CM 5 P  ? ? B DA  10 B 5CM 11 1_555 ? ? ? ? ? ? ?            1.626 ? ? 
covale6  covale both ? B 5CM 5 "O3'" ? ? ? 1_555 B DG  6 P  ? ? B 5CM 11 B DG  12 1_555 ? ? ? ? ? ? ?            1.604 ? ? 
metalc1  metalc ?    ? E HOH . O     ? ? ? 1_555 D MG  . MG ? ? A HOH 69 B MG  14 1_555 ? ? ? ? ? ? ?            2.124 ? ? 
metalc2  metalc ?    ? E HOH . O     ? ? ? 1_555 D MG  . MG ? ? A HOH 71 B MG  14 1_555 ? ? ? ? ? ? ?            2.076 ? ? 
metalc3  metalc ?    ? E HOH . O     ? ? ? 1_555 D MG  . MG ? ? A HOH 72 B MG  14 1_555 ? ? ? ? ? ? ?            2.050 ? ? 
metalc4  metalc ?    ? E HOH . O     ? ? ? 1_555 D MG  . MG ? ? A HOH 73 B MG  14 1_555 ? ? ? ? ? ? ?            2.189 ? ? 
metalc5  metalc ?    ? E HOH . O     ? ? ? 1_555 D MG  . MG ? ? A HOH 74 B MG  14 1_555 ? ? ? ? ? ? ?            2.079 ? ? 
metalc6  metalc ?    ? B DU  3 OP2   ? ? ? 1_555 C MG  . MG ? ? B DU  9  B MG  13 1_555 ? ? ? ? ? ? ?            1.968 ? ? 
metalc7  metalc ?    ? C MG  . MG    ? ? ? 1_555 F HOH . O  ? ? B MG  13 B HOH 64 1_555 ? ? ? ? ? ? ?            2.051 ? ? 
metalc8  metalc ?    ? C MG  . MG    ? ? ? 1_555 F HOH . O  ? ? B MG  13 B HOH 65 1_555 ? ? ? ? ? ? ?            2.090 ? ? 
metalc9  metalc ?    ? C MG  . MG    ? ? ? 1_555 F HOH . O  ? ? B MG  13 B HOH 66 1_555 ? ? ? ? ? ? ?            2.240 ? ? 
metalc10 metalc ?    ? C MG  . MG    ? ? ? 1_555 F HOH . O  ? ? B MG  13 B HOH 67 1_555 ? ? ? ? ? ? ?            2.024 ? ? 
metalc11 metalc ?    ? C MG  . MG    ? ? ? 1_555 F HOH . O  ? ? B MG  13 B HOH 68 1_555 ? ? ? ? ? ? ?            2.180 ? ? 
metalc12 metalc ?    ? D MG  . MG    ? ? ? 1_555 F HOH . O  ? ? B MG  14 B HOH 70 1_555 ? ? ? ? ? ? ?            2.171 ? ? 
hydrog1  hydrog ?    ? A 5CM 1 N3    ? ? ? 1_555 B DG  6 N1 ? ? A 5CM 1  B DG  12 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A 5CM 1 N4    ? ? ? 1_555 B DG  6 O6 ? ? A 5CM 1  B DG  12 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A 5CM 1 O2    ? ? ? 1_555 B DG  6 N2 ? ? A 5CM 1  B DG  12 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A DG  2 N1    ? ? ? 1_555 B 5CM 5 N3 ? ? A DG  2  B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A DG  2 N2    ? ? ? 1_555 B 5CM 5 O2 ? ? A DG  2  B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A DG  2 O6    ? ? ? 1_555 B 5CM 5 N4 ? ? A DG  2  B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A DU  3 N3    ? ? ? 1_555 B DA  4 N1 ? ? A DU  3  B DA  10 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A DU  3 O4    ? ? ? 1_555 B DA  4 N6 ? ? A DU  3  B DA  10 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A DA  4 N1    ? ? ? 1_555 B DU  3 N3 ? ? A DA  4  B DU  9  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A DA  4 N6    ? ? ? 1_555 B DU  3 O4 ? ? A DA  4  B DU  9  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A 5CM 5 N3    ? ? ? 1_555 B DG  2 N1 ? ? A 5CM 5  B DG  8  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A 5CM 5 N4    ? ? ? 1_555 B DG  2 O6 ? ? A 5CM 5  B DG  8  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A 5CM 5 O2    ? ? ? 1_555 B DG  2 N2 ? ? A 5CM 5  B DG  8  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A DG  6 N1    ? ? ? 1_555 B 5CM 1 N3 ? ? A DG  6  B 5CM 7  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A DG  6 N2    ? ? ? 1_555 B 5CM 1 O2 ? ? A DG  6  B 5CM 7  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A DG  6 O6    ? ? ? 1_555 B 5CM 1 N4 ? ? A DG  6  B 5CM 7  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O   ? E HOH . ? A HOH 69 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 71 ? 1_555 94.3  ? 
2  O   ? E HOH . ? A HOH 69 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 72 ? 1_555 85.9  ? 
3  O   ? E HOH . ? A HOH 71 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 72 ? 1_555 177.3 ? 
4  O   ? E HOH . ? A HOH 69 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 73 ? 1_555 85.9  ? 
5  O   ? E HOH . ? A HOH 71 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 73 ? 1_555 82.6  ? 
6  O   ? E HOH . ? A HOH 72 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 73 ? 1_555 94.7  ? 
7  O   ? E HOH . ? A HOH 69 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 74 ? 1_555 92.3  ? 
8  O   ? E HOH . ? A HOH 71 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 74 ? 1_555 83.9  ? 
9  O   ? E HOH . ? A HOH 72 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 74 ? 1_555 98.8  ? 
10 O   ? E HOH . ? A HOH 73 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? E HOH . ? A HOH 74 ? 1_555 166.2 ? 
11 O   ? E HOH . ? A HOH 69 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? F HOH . ? B HOH 70 ? 1_555 175.0 ? 
12 O   ? E HOH . ? A HOH 71 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? F HOH . ? B HOH 70 ? 1_555 89.5  ? 
13 O   ? E HOH . ? A HOH 72 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? F HOH . ? B HOH 70 ? 1_555 90.2  ? 
14 O   ? E HOH . ? A HOH 73 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? F HOH . ? B HOH 70 ? 1_555 91.3  ? 
15 O   ? E HOH . ? A HOH 74 ? 1_555 MG ? D MG . ? B MG 14 ? 1_555 O ? F HOH . ? B HOH 70 ? 1_555 91.3  ? 
16 OP2 ? B DU  3 ? B DU  9  ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 64 ? 1_555 91.5  ? 
17 OP2 ? B DU  3 ? B DU  9  ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 65 ? 1_555 89.0  ? 
18 O   ? F HOH . ? B HOH 64 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 65 ? 1_555 172.7 ? 
19 OP2 ? B DU  3 ? B DU  9  ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 66 ? 1_555 91.3  ? 
20 O   ? F HOH . ? B HOH 64 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 66 ? 1_555 89.9  ? 
21 O   ? F HOH . ? B HOH 65 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 66 ? 1_555 82.9  ? 
22 OP2 ? B DU  3 ? B DU  9  ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 67 ? 1_555 96.8  ? 
23 O   ? F HOH . ? B HOH 64 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 67 ? 1_555 105.1 ? 
24 O   ? F HOH . ? B HOH 65 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 67 ? 1_555 82.0  ? 
25 O   ? F HOH . ? B HOH 66 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 67 ? 1_555 162.6 ? 
26 OP2 ? B DU  3 ? B DU  9  ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 68 ? 1_555 172.0 ? 
27 O   ? F HOH . ? B HOH 64 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 68 ? 1_555 96.0  ? 
28 O   ? F HOH . ? B HOH 65 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 68 ? 1_555 83.2  ? 
29 O   ? F HOH . ? B HOH 66 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 68 ? 1_555 86.0  ? 
30 O   ? F HOH . ? B HOH 67 ? 1_555 MG ? C MG . ? B MG 13 ? 1_555 O ? F HOH . ? B HOH 68 ? 1_555 83.9  ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software B MG 13 ? 6 'BINDING SITE FOR RESIDUE MG B 13' 
AC2 Software B MG 14 ? 6 'BINDING SITE FOR RESIDUE MG B 14' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 6 DU  B 3 ? DU  B 9  . ? 1_555 ? 
2  AC1 6 HOH F . ? HOH B 64 . ? 1_555 ? 
3  AC1 6 HOH F . ? HOH B 65 . ? 1_555 ? 
4  AC1 6 HOH F . ? HOH B 66 . ? 1_555 ? 
5  AC1 6 HOH F . ? HOH B 67 . ? 1_555 ? 
6  AC1 6 HOH F . ? HOH B 68 . ? 1_555 ? 
7  AC2 6 HOH E . ? HOH A 69 . ? 1_555 ? 
8  AC2 6 HOH E . ? HOH A 71 . ? 1_555 ? 
9  AC2 6 HOH E . ? HOH A 72 . ? 1_555 ? 
10 AC2 6 HOH E . ? HOH A 73 . ? 1_555 ? 
11 AC2 6 HOH E . ? HOH A 74 . ? 1_555 ? 
12 AC2 6 HOH F . ? HOH B 70 . ? 1_555 ? 
# 
loop_
_pdbx_validate_close_contact.id 
_pdbx_validate_close_contact.PDB_model_num 
_pdbx_validate_close_contact.auth_atom_id_1 
_pdbx_validate_close_contact.auth_asym_id_1 
_pdbx_validate_close_contact.auth_comp_id_1 
_pdbx_validate_close_contact.auth_seq_id_1 
_pdbx_validate_close_contact.PDB_ins_code_1 
_pdbx_validate_close_contact.label_alt_id_1 
_pdbx_validate_close_contact.auth_atom_id_2 
_pdbx_validate_close_contact.auth_asym_id_2 
_pdbx_validate_close_contact.auth_comp_id_2 
_pdbx_validate_close_contact.auth_seq_id_2 
_pdbx_validate_close_contact.PDB_ins_code_2 
_pdbx_validate_close_contact.label_alt_id_2 
_pdbx_validate_close_contact.dist 
1 1 O     A HOH 19 ? ? O A HOH 39 ? ? 1.69 
2 1 "O3'" A DG  2  ? ? O A HOH 20 ? ? 1.92 
3 1 "C5'" B 5CM 7  ? ? O B HOH 30 ? ? 2.16 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1  1 "C4'" A DG  2  ? ? "C3'" A DG 2  ? ? 1.636 1.529 0.107  0.010 N 
2  1 "C3'" A DG  2  ? ? "C2'" A DG 2  ? ? 1.454 1.516 -0.062 0.008 N 
3  1 "C2'" A DG  2  ? ? "C1'" A DG 2  ? ? 1.646 1.519 0.127  0.010 N 
4  1 "O4'" A DG  2  ? ? "C1'" A DG 2  ? ? 1.502 1.420 0.082  0.011 N 
5  1 "C1'" A DG  2  ? ? N9    A DG 2  ? ? 1.326 1.468 -0.142 0.014 N 
6  1 N1    A DG  2  ? ? C2    A DG 2  ? ? 1.307 1.373 -0.066 0.008 N 
7  1 C2    A DG  2  ? ? N3    A DG 2  ? ? 1.275 1.323 -0.048 0.008 N 
8  1 N7    A DG  2  ? ? C8    A DG 2  ? ? 1.356 1.305 0.051  0.006 N 
9  1 C2    A DG  2  ? ? N2    A DG 2  ? ? 1.251 1.341 -0.090 0.010 N 
10 1 "O3'" A DG  2  ? ? P     A DU 3  ? ? 1.696 1.607 0.089  0.012 Y 
11 1 "C2'" A DU  3  ? ? "C1'" A DU 3  ? ? 1.663 1.519 0.144  0.010 N 
12 1 "O4'" A DA  4  ? ? "C1'" A DA 4  ? ? 1.556 1.420 0.136  0.011 N 
13 1 C4    A DA  4  ? ? C5    A DA 4  ? ? 1.318 1.383 -0.065 0.007 N 
14 1 N7    A DA  4  ? ? C8    A DA 4  ? ? 1.354 1.311 0.043  0.007 N 
15 1 C8    A DA  4  ? ? N9    A DA 4  ? ? 1.302 1.373 -0.071 0.008 N 
16 1 C6    A DA  4  ? ? N6    A DA 4  ? ? 1.412 1.335 0.077  0.008 N 
17 1 P     A DG  6  ? ? "O5'" A DG 6  ? ? 1.676 1.593 0.083  0.010 N 
18 1 "C5'" A DG  6  ? ? "C4'" A DG 6  ? ? 1.594 1.512 0.082  0.007 N 
19 1 "C4'" A DG  6  ? ? "C3'" A DG 6  ? ? 1.413 1.521 -0.108 0.010 N 
20 1 "C3'" A DG  6  ? ? "C2'" A DG 6  ? ? 1.439 1.516 -0.077 0.008 N 
21 1 N1    A DG  6  ? ? C2    A DG 6  ? ? 1.301 1.373 -0.072 0.008 N 
22 1 C2    A DG  6  ? ? N3    A DG 6  ? ? 1.376 1.323 0.053  0.008 N 
23 1 C4    A DG  6  ? ? C5    A DG 6  ? ? 1.316 1.379 -0.063 0.007 N 
24 1 C5    A DG  6  ? ? N7    A DG 6  ? ? 1.444 1.388 0.056  0.006 N 
25 1 C8    A DG  6  ? ? N9    A DG 6  ? ? 1.306 1.374 -0.068 0.007 N 
26 1 "O3'" B 5CM 7  ? ? P     B DG 8  ? ? 1.523 1.607 -0.084 0.012 Y 
27 1 "C4'" B DG  8  ? ? "C3'" B DG 8  ? ? 1.663 1.529 0.134  0.010 N 
28 1 "C3'" B DG  8  ? ? "C2'" B DG 8  ? ? 1.447 1.516 -0.069 0.008 N 
29 1 "C2'" B DG  8  ? ? "C1'" B DG 8  ? ? 1.409 1.518 -0.109 0.010 N 
30 1 "O4'" B DG  8  ? ? "C1'" B DG 8  ? ? 1.503 1.420 0.083  0.011 N 
31 1 N7    B DG  8  ? ? C8    B DG 8  ? ? 1.385 1.305 0.080  0.006 N 
32 1 C8    B DG  8  ? ? N9    B DG 8  ? ? 1.329 1.374 -0.045 0.007 N 
33 1 N9    B DG  8  ? ? C4    B DG 8  ? ? 1.456 1.375 0.081  0.008 N 
34 1 C2    B DG  8  ? ? N2    B DG 8  ? ? 1.265 1.341 -0.076 0.010 N 
35 1 "C5'" B DU  9  ? ? "C4'" B DU 9  ? ? 1.560 1.512 0.048  0.007 N 
36 1 "C2'" B DU  9  ? ? "C1'" B DU 9  ? ? 1.605 1.519 0.086  0.010 N 
37 1 "O3'" B DU  9  ? ? "C3'" B DU 9  ? ? 1.358 1.419 -0.061 0.006 N 
38 1 "C1'" B DU  9  ? ? N1    B DU 9  ? ? 1.607 1.488 0.119  0.013 N 
39 1 N1    B DU  9  ? ? C2    B DU 9  ? ? 1.318 1.381 -0.063 0.009 N 
40 1 P     B DA  10 ? ? OP2   B DA 10 ? ? 1.372 1.485 -0.113 0.017 N 
41 1 P     B DA  10 ? ? "O5'" B DA 10 ? ? 1.681 1.593 0.088  0.010 N 
42 1 "C5'" B DA  10 ? ? "C4'" B DA 10 ? ? 1.429 1.509 -0.080 0.011 N 
43 1 "C1'" B DA  10 ? ? N9    B DA 10 ? ? 1.379 1.468 -0.089 0.014 N 
44 1 C2    B DA  10 ? ? N3    B DA 10 ? ? 1.389 1.331 0.058  0.009 N 
45 1 C6    B DA  10 ? ? N6    B DA 10 ? ? 1.384 1.335 0.049  0.008 N 
46 1 P     B DG  12 ? ? "O5'" B DG 12 ? ? 1.675 1.593 0.082  0.010 N 
47 1 "C3'" B DG  12 ? ? "C2'" B DG 12 ? ? 1.466 1.516 -0.050 0.008 N 
48 1 "O4'" B DG  12 ? ? "C4'" B DG 12 ? ? 1.344 1.446 -0.102 0.010 N 
49 1 "O3'" B DG  12 ? ? "C3'" B DG 12 ? ? 1.320 1.419 -0.099 0.006 N 
50 1 N1    B DG  12 ? ? C2    B DG 12 ? ? 1.309 1.373 -0.064 0.008 N 
51 1 N7    B DG  12 ? ? C8    B DG 12 ? ? 1.355 1.305 0.050  0.006 N 
52 1 C8    B DG  12 ? ? N9    B DG 12 ? ? 1.327 1.374 -0.047 0.007 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 OP1   A DG 2  ? ? P     A DG 2  ? ? OP2   A DG  2  ? ? 136.88 119.60 17.28  1.50 N 
2  1 "O5'" A DG 2  ? ? P     A DG 2  ? ? OP1   A DG  2  ? ? 90.48  105.70 -15.22 0.90 N 
3  1 "O5'" A DG 2  ? ? P     A DG 2  ? ? OP2   A DG  2  ? ? 119.28 110.70 8.58   1.20 N 
4  1 "C4'" A DG 2  ? ? "C3'" A DG 2  ? ? "C2'" A DG  2  ? ? 109.24 103.10 6.14   0.90 N 
5  1 N1    A DG 2  ? ? C2    A DG 2  ? ? N3    A DG  2  ? ? 130.67 123.90 6.77   0.60 N 
6  1 C4    A DG 2  ? ? C5    A DG 2  ? ? N7    A DG  2  ? ? 114.70 110.80 3.90   0.40 N 
7  1 C5    A DG 2  ? ? N7    A DG 2  ? ? C8    A DG  2  ? ? 100.53 104.30 -3.77  0.50 N 
8  1 N3    A DG 2  ? ? C2    A DG 2  ? ? N2    A DG  2  ? ? 111.79 119.90 -8.11  0.70 N 
9  1 C5    A DG 2  ? ? C6    A DG 2  ? ? O6    A DG  2  ? ? 123.97 128.60 -4.63  0.60 N 
10 1 "O3'" A DG 2  ? ? P     A DU 3  ? ? OP1   A DU  3  ? ? 91.46  105.20 -13.74 2.20 Y 
11 1 "O5'" A DU 3  ? ? "C5'" A DU 3  ? ? "C4'" A DU  3  ? ? 91.88  109.40 -17.52 0.80 N 
12 1 "O4'" A DU 3  ? ? "C4'" A DU 3  ? ? "C3'" A DU  3  ? ? 101.72 104.50 -2.78  0.40 N 
13 1 "C4'" A DU 3  ? ? "C3'" A DU 3  ? ? "C2'" A DU  3  ? ? 110.35 103.10 7.25   0.90 N 
14 1 "C3'" A DU 3  ? ? "C2'" A DU 3  ? ? "C1'" A DU  3  ? ? 91.79  102.40 -10.61 0.80 N 
15 1 "O4'" A DU 3  ? ? "C1'" A DU 3  ? ? N1    A DU  3  ? ? 102.55 108.00 -5.45  0.70 N 
16 1 "O5'" A DA 4  ? ? "C5'" A DA 4  ? ? "C4'" A DA  4  ? ? 102.94 109.40 -6.46  0.80 N 
17 1 "C4'" A DA 4  ? ? "C3'" A DA 4  ? ? "O3'" A DA  4  ? ? 94.23  109.70 -15.47 2.50 N 
18 1 "C3'" A DA 4  ? ? "C2'" A DA 4  ? ? "C1'" A DA  4  ? ? 109.90 102.50 7.40   1.20 N 
19 1 "O4'" A DA 4  ? ? "C1'" A DA 4  ? ? "C2'" A DA  4  ? ? 100.77 105.90 -5.13  0.80 N 
20 1 C5    A DA 4  ? ? N7    A DA 4  ? ? C8    A DA  4  ? ? 100.48 103.90 -3.42  0.50 N 
21 1 "O5'" A DG 6  ? ? P     A DG 6  ? ? OP1   A DG  6  ? ? 98.14  105.70 -7.56  0.90 N 
22 1 "O5'" A DG 6  ? ? P     A DG 6  ? ? OP2   A DG  6  ? ? 119.25 110.70 8.55   1.20 N 
23 1 "O5'" A DG 6  ? ? "C5'" A DG 6  ? ? "C4'" A DG  6  ? ? 96.17  109.40 -13.23 0.80 N 
24 1 P     A DG 6  ? ? "O5'" A DG 6  ? ? "C5'" A DG  6  ? ? 108.03 120.90 -12.87 1.60 N 
25 1 "O4'" A DG 6  ? ? "C4'" A DG 6  ? ? "C3'" A DG  6  ? ? 115.35 106.00 9.35   0.60 N 
26 1 "C4'" A DG 6  ? ? "C3'" A DG 6  ? ? "C2'" A DG  6  ? ? 97.70  102.20 -4.50  0.70 N 
27 1 "C3'" A DG 6  ? ? "C2'" A DG 6  ? ? "C1'" A DG  6  ? ? 110.98 102.50 8.48   1.20 N 
28 1 C6    A DG 6  ? ? N1    A DG 6  ? ? C2    A DG  6  ? ? 116.03 125.10 -9.07  0.60 N 
29 1 N1    A DG 6  ? ? C2    A DG 6  ? ? N3    A DG  6  ? ? 130.87 123.90 6.97   0.60 N 
30 1 C2    A DG 6  ? ? N3    A DG 6  ? ? C4    A DG  6  ? ? 106.83 111.90 -5.07  0.50 N 
31 1 C5    A DG 6  ? ? C6    A DG 6  ? ? N1    A DG  6  ? ? 116.46 111.50 4.96   0.50 N 
32 1 C8    A DG 6  ? ? N9    A DG 6  ? ? C4    A DG  6  ? ? 109.82 106.40 3.42   0.40 N 
33 1 N3    A DG 6  ? ? C2    A DG 6  ? ? N2    A DG  6  ? ? 111.08 119.90 -8.82  0.70 N 
34 1 N1    A DG 6  ? ? C6    A DG 6  ? ? O6    A DG  6  ? ? 114.98 119.90 -4.92  0.60 N 
35 1 "O5'" B DG 8  ? ? "C5'" B DG 8  ? ? "C4'" B DG  8  ? ? 98.77  109.40 -10.63 0.80 N 
36 1 "C5'" B DG 8  ? ? "C4'" B DG 8  ? ? "C3'" B DG  8  ? ? 101.16 114.10 -12.94 1.80 N 
37 1 "C5'" B DG 8  ? ? "C4'" B DG 8  ? ? "O4'" B DG  8  ? ? 117.14 109.80 7.34   1.10 N 
38 1 "O4'" B DG 8  ? ? "C1'" B DG 8  ? ? "C2'" B DG  8  ? ? 114.40 106.80 7.60   0.50 N 
39 1 C6    B DG 8  ? ? N1    B DG 8  ? ? C2    B DG  8  ? ? 117.93 125.10 -7.17  0.60 N 
40 1 N1    B DG 8  ? ? C2    B DG 8  ? ? N3    B DG  8  ? ? 128.53 123.90 4.63   0.60 N 
41 1 C5    B DG 8  ? ? C6    B DG 8  ? ? N1    B DG  8  ? ? 117.71 111.50 6.21   0.50 N 
42 1 C4    B DG 8  ? ? C5    B DG 8  ? ? N7    B DG  8  ? ? 115.01 110.80 4.21   0.40 N 
43 1 N9    B DG 8  ? ? C4    B DG 8  ? ? C5    B DG  8  ? ? 101.70 105.40 -3.70  0.40 N 
44 1 N3    B DG 8  ? ? C4    B DG 8  ? ? N9    B DG  8  ? ? 130.94 126.00 4.94   0.60 N 
45 1 N3    B DG 8  ? ? C2    B DG 8  ? ? N2    B DG  8  ? ? 111.78 119.90 -8.12  0.70 N 
46 1 C5    B DG 8  ? ? C6    B DG 8  ? ? O6    B DG  8  ? ? 123.41 128.60 -5.19  0.60 N 
47 1 "C3'" B DG 8  ? ? "O3'" B DG 8  ? ? P     B DU  9  ? ? 129.67 119.70 9.97   1.20 Y 
48 1 OP1   B DU 9  ? ? P     B DU 9  ? ? OP2   B DU  9  ? ? 105.24 119.60 -14.36 1.50 N 
49 1 "O5'" B DU 9  ? ? P     B DU 9  ? ? OP1   B DU  9  ? ? 117.97 110.70 7.27   1.20 N 
50 1 "O5'" B DU 9  ? ? "C5'" B DU 9  ? ? "C4'" B DU  9  ? ? 104.36 109.40 -5.04  0.80 N 
51 1 "O4'" B DU 9  ? ? "C4'" B DU 9  ? ? "C3'" B DU  9  ? ? 101.12 104.50 -3.38  0.40 N 
52 1 "C5'" B DU 9  ? ? "C4'" B DU 9  ? ? "C3'" B DU  9  ? ? 124.46 115.70 8.76   1.20 N 
53 1 "C3'" B DU 9  ? ? "C2'" B DU 9  ? ? "C1'" B DU  9  ? ? 93.73  102.40 -8.67  0.80 N 
54 1 "O4'" B DU 9  ? ? "C1'" B DU 9  ? ? N1    B DU  9  ? ? 102.26 108.00 -5.74  0.70 N 
55 1 C6    B DU 9  ? ? N1    B DU 9  ? ? C2    B DU  9  ? ? 125.84 121.00 4.84   0.60 N 
56 1 C5    B DU 9  ? ? C6    B DU 9  ? ? N1    B DU  9  ? ? 116.26 122.70 -6.44  0.50 N 
57 1 N3    B DU 9  ? ? C4    B DU 9  ? ? O4    B DU  9  ? ? 114.22 119.40 -5.18  0.70 N 
58 1 "C3'" B DU 9  ? ? "O3'" B DU 9  ? ? P     B DA  10 ? ? 128.11 119.70 8.41   1.20 Y 
59 1 "O5'" B DA 10 ? ? P     B DA 10 ? ? OP2   B DA  10 ? ? 98.50  105.70 -7.20  0.90 N 
60 1 "O5'" B DA 10 ? ? "C5'" B DA 10 ? ? "C4'" B DA  10 ? ? 104.37 109.40 -5.03  0.80 N 
61 1 "O4'" B DA 10 ? ? "C4'" B DA 10 ? ? "C3'" B DA  10 ? ? 100.51 104.50 -3.99  0.40 N 
62 1 "C1'" B DA 10 ? ? "O4'" B DA 10 ? ? "C4'" B DA  10 ? ? 119.45 110.30 9.15   0.70 N 
63 1 "C4'" B DA 10 ? ? "C3'" B DA 10 ? ? "C2'" B DA  10 ? ? 111.42 103.10 8.32   0.90 N 
64 1 "O4'" B DA 10 ? ? "C1'" B DA 10 ? ? "C2'" B DA  10 ? ? 101.05 105.90 -4.85  0.80 N 
65 1 "O4'" B DA 10 ? ? "C1'" B DA 10 ? ? N9    B DA  10 ? ? 114.74 108.30 6.44   0.30 N 
66 1 N1    B DA 10 ? ? C2    B DA 10 ? ? N3    B DA  10 ? ? 125.62 129.30 -3.68  0.50 N 
67 1 N9    B DA 10 ? ? C4    B DA 10 ? ? C5    B DA  10 ? ? 102.66 105.80 -3.14  0.40 N 
68 1 N1    B DA 10 ? ? C6    B DA 10 ? ? N6    B DA  10 ? ? 123.38 118.60 4.78   0.60 N 
69 1 C5    B DA 10 ? ? C6    B DA 10 ? ? N6    B DA  10 ? ? 118.60 123.70 -5.10  0.80 N 
70 1 "C3'" B DA 10 ? ? "O3'" B DA 10 ? ? P     B 5CM 11 ? ? 128.41 119.70 8.71   1.20 Y 
71 1 "O5'" B DG 12 ? ? P     B DG 12 ? ? OP1   B DG  12 ? ? 122.08 110.70 11.38  1.20 N 
72 1 "O5'" B DG 12 ? ? P     B DG 12 ? ? OP2   B DG  12 ? ? 89.11  105.70 -16.59 0.90 N 
73 1 "O4'" B DG 12 ? ? "C4'" B DG 12 ? ? "C3'" B DG  12 ? ? 94.67  104.50 -9.83  0.40 N 
74 1 "C5'" B DG 12 ? ? "C4'" B DG 12 ? ? "C3'" B DG  12 ? ? 123.40 115.70 7.70   1.20 N 
75 1 "C4'" B DG 12 ? ? "C3'" B DG 12 ? ? "C2'" B DG  12 ? ? 112.64 103.10 9.54   0.90 N 
76 1 "C3'" B DG 12 ? ? "C2'" B DG 12 ? ? "C1'" B DG  12 ? ? 96.80  102.40 -5.60  0.80 N 
77 1 C6    B DG 12 ? ? N1    B DG 12 ? ? C2    B DG  12 ? ? 112.63 125.10 -12.47 0.60 N 
78 1 N1    B DG 12 ? ? C2    B DG 12 ? ? N3    B DG  12 ? ? 136.92 123.90 13.02  0.60 N 
79 1 N3    B DG 12 ? ? C4    B DG 12 ? ? C5    B DG  12 ? ? 124.38 128.60 -4.22  0.50 N 
80 1 C5    B DG 12 ? ? C6    B DG 12 ? ? N1    B DG  12 ? ? 117.23 111.50 5.73   0.50 N 
81 1 C8    B DG 12 ? ? N9    B DG 12 ? ? C4    B DG  12 ? ? 109.25 106.40 2.85   0.40 N 
82 1 N3    B DG 12 ? ? C4    B DG 12 ? ? N9    B DG  12 ? ? 132.16 126.00 6.16   0.60 N 
83 1 N3    B DG 12 ? ? C2    B DG 12 ? ? N2    B DG  12 ? ? 103.37 119.90 -16.53 0.70 N 
84 1 C5    B DG 12 ? ? C6    B DG 12 ? ? O6    B DG  12 ? ? 121.29 128.60 -7.31  0.60 N 
# 
loop_
_pdbx_struct_mod_residue.id 
_pdbx_struct_mod_residue.label_asym_id 
_pdbx_struct_mod_residue.label_comp_id 
_pdbx_struct_mod_residue.label_seq_id 
_pdbx_struct_mod_residue.auth_asym_id 
_pdbx_struct_mod_residue.auth_comp_id 
_pdbx_struct_mod_residue.auth_seq_id 
_pdbx_struct_mod_residue.PDB_ins_code 
_pdbx_struct_mod_residue.parent_comp_id 
_pdbx_struct_mod_residue.details 
1 A 5CM 1 A 5CM 1  ? DC ? 
2 A 5CM 5 A 5CM 5  ? DC ? 
3 B 5CM 1 B 5CM 7  ? DC ? 
4 B 5CM 5 B 5CM 11 ? DC ? 
# 
loop_
_refine_B_iso.class 
_refine_B_iso.details 
_refine_B_iso.treatment 
_refine_B_iso.pdbx_refine_id 
'ALL ATOMS'  TR isotropic 'X-RAY DIFFRACTION' 
'ALL IONS'   TR isotropic 'X-RAY DIFFRACTION' 
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' 
# 
loop_
_refine_occupancy.class 
_refine_occupancy.treatment 
_refine_occupancy.pdbx_refine_id 
'ALL ATOMS'  fix 'X-RAY DIFFRACTION' 
'ALL IONS'   fix 'X-RAY DIFFRACTION' 
'ALL WATERS' fix 'X-RAY DIFFRACTION' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
5CM N1     N  N N 1   
5CM C2     C  N N 2   
5CM N3     N  N N 3   
5CM C4     C  N N 4   
5CM C5     C  N N 5   
5CM C5A    C  N N 6   
5CM C6     C  N N 7   
5CM O2     O  N N 8   
5CM N4     N  N N 9   
5CM "C1'"  C  N R 10  
5CM "C2'"  C  N N 11  
5CM "C3'"  C  N S 12  
5CM "C4'"  C  N R 13  
5CM "O4'"  O  N N 14  
5CM "O3'"  O  N N 15  
5CM "C5'"  C  N N 16  
5CM "O5'"  O  N N 17  
5CM P      P  N N 18  
5CM OP1    O  N N 19  
5CM OP2    O  N N 20  
5CM OP3    O  N N 21  
5CM H5A1   H  N N 22  
5CM H5A2   H  N N 23  
5CM H5A3   H  N N 24  
5CM H6     H  N N 25  
5CM HN41   H  N N 26  
5CM HN42   H  N N 27  
5CM "H1'"  H  N N 28  
5CM "H2'"  H  N N 29  
5CM "H2''" H  N N 30  
5CM "H3'"  H  N N 31  
5CM "H4'"  H  N N 32  
5CM "HO3'" H  N N 33  
5CM "H5'"  H  N N 34  
5CM "H5''" H  N N 35  
5CM HOP2   H  N N 36  
5CM HOP3   H  N N 37  
DA  OP3    O  N N 38  
DA  P      P  N N 39  
DA  OP1    O  N N 40  
DA  OP2    O  N N 41  
DA  "O5'"  O  N N 42  
DA  "C5'"  C  N N 43  
DA  "C4'"  C  N R 44  
DA  "O4'"  O  N N 45  
DA  "C3'"  C  N S 46  
DA  "O3'"  O  N N 47  
DA  "C2'"  C  N N 48  
DA  "C1'"  C  N R 49  
DA  N9     N  Y N 50  
DA  C8     C  Y N 51  
DA  N7     N  Y N 52  
DA  C5     C  Y N 53  
DA  C6     C  Y N 54  
DA  N6     N  N N 55  
DA  N1     N  Y N 56  
DA  C2     C  Y N 57  
DA  N3     N  Y N 58  
DA  C4     C  Y N 59  
DA  HOP3   H  N N 60  
DA  HOP2   H  N N 61  
DA  "H5'"  H  N N 62  
DA  "H5''" H  N N 63  
DA  "H4'"  H  N N 64  
DA  "H3'"  H  N N 65  
DA  "HO3'" H  N N 66  
DA  "H2'"  H  N N 67  
DA  "H2''" H  N N 68  
DA  "H1'"  H  N N 69  
DA  H8     H  N N 70  
DA  H61    H  N N 71  
DA  H62    H  N N 72  
DA  H2     H  N N 73  
DG  OP3    O  N N 74  
DG  P      P  N N 75  
DG  OP1    O  N N 76  
DG  OP2    O  N N 77  
DG  "O5'"  O  N N 78  
DG  "C5'"  C  N N 79  
DG  "C4'"  C  N R 80  
DG  "O4'"  O  N N 81  
DG  "C3'"  C  N S 82  
DG  "O3'"  O  N N 83  
DG  "C2'"  C  N N 84  
DG  "C1'"  C  N R 85  
DG  N9     N  Y N 86  
DG  C8     C  Y N 87  
DG  N7     N  Y N 88  
DG  C5     C  Y N 89  
DG  C6     C  N N 90  
DG  O6     O  N N 91  
DG  N1     N  N N 92  
DG  C2     C  N N 93  
DG  N2     N  N N 94  
DG  N3     N  N N 95  
DG  C4     C  Y N 96  
DG  HOP3   H  N N 97  
DG  HOP2   H  N N 98  
DG  "H5'"  H  N N 99  
DG  "H5''" H  N N 100 
DG  "H4'"  H  N N 101 
DG  "H3'"  H  N N 102 
DG  "HO3'" H  N N 103 
DG  "H2'"  H  N N 104 
DG  "H2''" H  N N 105 
DG  "H1'"  H  N N 106 
DG  H8     H  N N 107 
DG  H1     H  N N 108 
DG  H21    H  N N 109 
DG  H22    H  N N 110 
DU  OP3    O  N N 111 
DU  P      P  N N 112 
DU  OP1    O  N N 113 
DU  OP2    O  N N 114 
DU  "O5'"  O  N N 115 
DU  "C5'"  C  N N 116 
DU  "C4'"  C  N R 117 
DU  "O4'"  O  N N 118 
DU  "C3'"  C  N S 119 
DU  "O3'"  O  N N 120 
DU  "C2'"  C  N N 121 
DU  "C1'"  C  N R 122 
DU  N1     N  N N 123 
DU  C2     C  N N 124 
DU  O2     O  N N 125 
DU  N3     N  N N 126 
DU  C4     C  N N 127 
DU  O4     O  N N 128 
DU  C5     C  N N 129 
DU  C6     C  N N 130 
DU  HOP3   H  N N 131 
DU  HOP2   H  N N 132 
DU  "H5'"  H  N N 133 
DU  "H5''" H  N N 134 
DU  "H4'"  H  N N 135 
DU  "H3'"  H  N N 136 
DU  "HO3'" H  N N 137 
DU  "H2'"  H  N N 138 
DU  "H2''" H  N N 139 
DU  "H1'"  H  N N 140 
DU  H3     H  N N 141 
DU  H5     H  N N 142 
DU  H6     H  N N 143 
HOH O      O  N N 144 
HOH H1     H  N N 145 
HOH H2     H  N N 146 
MG  MG     MG N N 147 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5CM N1    C2     sing N N 1   
5CM N1    C6     sing N N 2   
5CM N1    "C1'"  sing N N 3   
5CM C2    N3     sing N N 4   
5CM C2    O2     doub N N 5   
5CM N3    C4     doub N N 6   
5CM C4    C5     sing N N 7   
5CM C4    N4     sing N N 8   
5CM C5    C5A    sing N N 9   
5CM C5    C6     doub N N 10  
5CM C5A   H5A1   sing N N 11  
5CM C5A   H5A2   sing N N 12  
5CM C5A   H5A3   sing N N 13  
5CM C6    H6     sing N N 14  
5CM N4    HN41   sing N N 15  
5CM N4    HN42   sing N N 16  
5CM "C1'" "C2'"  sing N N 17  
5CM "C1'" "O4'"  sing N N 18  
5CM "C1'" "H1'"  sing N N 19  
5CM "C2'" "C3'"  sing N N 20  
5CM "C2'" "H2'"  sing N N 21  
5CM "C2'" "H2''" sing N N 22  
5CM "C3'" "C4'"  sing N N 23  
5CM "C3'" "O3'"  sing N N 24  
5CM "C3'" "H3'"  sing N N 25  
5CM "C4'" "O4'"  sing N N 26  
5CM "C4'" "C5'"  sing N N 27  
5CM "C4'" "H4'"  sing N N 28  
5CM "O3'" "HO3'" sing N N 29  
5CM "C5'" "O5'"  sing N N 30  
5CM "C5'" "H5'"  sing N N 31  
5CM "C5'" "H5''" sing N N 32  
5CM "O5'" P      sing N N 33  
5CM P     OP1    doub N N 34  
5CM P     OP2    sing N N 35  
5CM P     OP3    sing N N 36  
5CM OP2   HOP2   sing N N 37  
5CM OP3   HOP3   sing N N 38  
DA  OP3   P      sing N N 39  
DA  OP3   HOP3   sing N N 40  
DA  P     OP1    doub N N 41  
DA  P     OP2    sing N N 42  
DA  P     "O5'"  sing N N 43  
DA  OP2   HOP2   sing N N 44  
DA  "O5'" "C5'"  sing N N 45  
DA  "C5'" "C4'"  sing N N 46  
DA  "C5'" "H5'"  sing N N 47  
DA  "C5'" "H5''" sing N N 48  
DA  "C4'" "O4'"  sing N N 49  
DA  "C4'" "C3'"  sing N N 50  
DA  "C4'" "H4'"  sing N N 51  
DA  "O4'" "C1'"  sing N N 52  
DA  "C3'" "O3'"  sing N N 53  
DA  "C3'" "C2'"  sing N N 54  
DA  "C3'" "H3'"  sing N N 55  
DA  "O3'" "HO3'" sing N N 56  
DA  "C2'" "C1'"  sing N N 57  
DA  "C2'" "H2'"  sing N N 58  
DA  "C2'" "H2''" sing N N 59  
DA  "C1'" N9     sing N N 60  
DA  "C1'" "H1'"  sing N N 61  
DA  N9    C8     sing Y N 62  
DA  N9    C4     sing Y N 63  
DA  C8    N7     doub Y N 64  
DA  C8    H8     sing N N 65  
DA  N7    C5     sing Y N 66  
DA  C5    C6     sing Y N 67  
DA  C5    C4     doub Y N 68  
DA  C6    N6     sing N N 69  
DA  C6    N1     doub Y N 70  
DA  N6    H61    sing N N 71  
DA  N6    H62    sing N N 72  
DA  N1    C2     sing Y N 73  
DA  C2    N3     doub Y N 74  
DA  C2    H2     sing N N 75  
DA  N3    C4     sing Y N 76  
DG  OP3   P      sing N N 77  
DG  OP3   HOP3   sing N N 78  
DG  P     OP1    doub N N 79  
DG  P     OP2    sing N N 80  
DG  P     "O5'"  sing N N 81  
DG  OP2   HOP2   sing N N 82  
DG  "O5'" "C5'"  sing N N 83  
DG  "C5'" "C4'"  sing N N 84  
DG  "C5'" "H5'"  sing N N 85  
DG  "C5'" "H5''" sing N N 86  
DG  "C4'" "O4'"  sing N N 87  
DG  "C4'" "C3'"  sing N N 88  
DG  "C4'" "H4'"  sing N N 89  
DG  "O4'" "C1'"  sing N N 90  
DG  "C3'" "O3'"  sing N N 91  
DG  "C3'" "C2'"  sing N N 92  
DG  "C3'" "H3'"  sing N N 93  
DG  "O3'" "HO3'" sing N N 94  
DG  "C2'" "C1'"  sing N N 95  
DG  "C2'" "H2'"  sing N N 96  
DG  "C2'" "H2''" sing N N 97  
DG  "C1'" N9     sing N N 98  
DG  "C1'" "H1'"  sing N N 99  
DG  N9    C8     sing Y N 100 
DG  N9    C4     sing Y N 101 
DG  C8    N7     doub Y N 102 
DG  C8    H8     sing N N 103 
DG  N7    C5     sing Y N 104 
DG  C5    C6     sing N N 105 
DG  C5    C4     doub Y N 106 
DG  C6    O6     doub N N 107 
DG  C6    N1     sing N N 108 
DG  N1    C2     sing N N 109 
DG  N1    H1     sing N N 110 
DG  C2    N2     sing N N 111 
DG  C2    N3     doub N N 112 
DG  N2    H21    sing N N 113 
DG  N2    H22    sing N N 114 
DG  N3    C4     sing N N 115 
DU  OP3   P      sing N N 116 
DU  OP3   HOP3   sing N N 117 
DU  P     OP1    doub N N 118 
DU  P     OP2    sing N N 119 
DU  P     "O5'"  sing N N 120 
DU  OP2   HOP2   sing N N 121 
DU  "O5'" "C5'"  sing N N 122 
DU  "C5'" "C4'"  sing N N 123 
DU  "C5'" "H5'"  sing N N 124 
DU  "C5'" "H5''" sing N N 125 
DU  "C4'" "O4'"  sing N N 126 
DU  "C4'" "C3'"  sing N N 127 
DU  "C4'" "H4'"  sing N N 128 
DU  "O4'" "C1'"  sing N N 129 
DU  "C3'" "O3'"  sing N N 130 
DU  "C3'" "C2'"  sing N N 131 
DU  "C3'" "H3'"  sing N N 132 
DU  "O3'" "HO3'" sing N N 133 
DU  "C2'" "C1'"  sing N N 134 
DU  "C2'" "H2'"  sing N N 135 
DU  "C2'" "H2''" sing N N 136 
DU  "C1'" N1     sing N N 137 
DU  "C1'" "H1'"  sing N N 138 
DU  N1    C2     sing N N 139 
DU  N1    C6     sing N N 140 
DU  C2    O2     doub N N 141 
DU  C2    N3     sing N N 142 
DU  N3    C4     sing N N 143 
DU  N3    H3     sing N N 144 
DU  C4    O4     doub N N 145 
DU  C4    C5     sing N N 146 
DU  C5    C6     doub N N 147 
DU  C5    H5     sing N N 148 
DU  C6    H6     sing N N 149 
HOH O     H1     sing N N 150 
HOH O     H2     sing N N 151 
# 
_ndb_struct_conf_na.entry_id   1D41 
_ndb_struct_conf_na.feature    'z-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A 5CM 1 1_555 B DG  6 1_555 -0.373 -0.194 -0.057 9.603  0.654  1.140  1 A_5CM1:DG12_B A 1 ? B 12 ? 19 1 
1 A DG  2 1_555 B 5CM 5 1_555 0.233  -0.182 0.148  -8.635 5.542  3.792  2 A_DG2:5CM11_B A 2 ? B 11 ? 19 1 
1 A DU  3 1_555 B DA  4 1_555 -0.220 -0.180 0.303  6.575  -7.867 -1.049 3 A_DU3:DA10_B  A 3 ? B 10 ? 20 1 
1 A DA  4 1_555 B DU  3 1_555 0.142  -0.057 -0.014 -6.124 -3.211 2.754  4 A_DA4:DU9_B   A 4 ? B 9  ? 20 1 
1 A 5CM 5 1_555 B DG  2 1_555 -0.350 -0.173 0.026  -0.009 -0.801 -0.128 5 A_5CM5:DG8_B  A 5 ? B 8  ? 19 1 
1 A DG  6 1_555 B 5CM 1 1_555 0.226  -0.127 0.056  -3.364 -2.506 -0.735 6 A_DG6:5CM7_B  A 6 ? B 7  ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A 5CM 1 1_555 B DG  6 1_555 A DG  2 1_555 B 5CM 5 1_555 0.188  5.702  4.068 1.678  0.085  -11.575 -28.124 3.752  3.958 -0.418 
8.261   -11.696 1 AA_5CM1DG2:5CM11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ? 
1 A DG  2 1_555 B 5CM 5 1_555 A DU  3 1_555 B DA  4 1_555 -0.174 -0.627 3.227 -1.901 0.256  -46.887 0.767   -0.373 3.221 -0.322 
-2.389  -46.924 2 AA_DG2DU3:DA105CM11_BB  A 2 ? B 11 ? A 3 ? B 10 ? 
1 A DU  3 1_555 B DA  4 1_555 A DA  4 1_555 B DU  3 1_555 0.309  5.254  3.873 2.250  -9.946 -12.025 -6.039  4.097  6.221 39.429 
8.919   -15.754 3 AA_DU3DA4:DU9DA10_BB    A 3 ? B 10 ? A 4 ? B 9  ? 
1 A DA  4 1_555 B DU  3 1_555 A 5CM 5 1_555 B DG  2 1_555 -0.279 -1.142 3.409 0.258  -1.165 -48.444 1.484   -0.320 3.384 1.419  
0.314   -48.458 4 AA_DA45CM5:DG8DU9_BB    A 4 ? B 9  ? A 5 ? B 8  ? 
1 A 5CM 5 1_555 B DG  2 1_555 A DG  6 1_555 B 5CM 1 1_555 0.000  5.551  3.558 -2.702 -0.295 -14.031 -22.017 -2.735 3.608 1.192  
-10.928 -14.290 5 AA_5CM5DG6:5CM7DG8_BB   A 5 ? B 8  ? A 6 ? B 7  ? 
# 
_pdbx_initial_refinement_model.accession_code   1VTW 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.details          
'ZDFB06 IN WHICH THE METHYL GROUPS OF THE THYMINE BASES WERE REMOVED FROM THE C5 POSITIONS.' 
# 
_atom_sites.entry_id                    1D41 
_atom_sites.fract_transf_matrix[1][1]   0.056117 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.032852 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.022462 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
MG 
N  
O  
P  
# 
loop_
_atom_site.group_PDB 
_atom_site.id 
_atom_site.type_symbol 
_atom_site.label_atom_id 
_atom_site.label_alt_id 
_atom_site.label_comp_id 
_atom_site.label_asym_id 
_atom_site.label_entity_id 
_atom_site.label_seq_id 
_atom_site.pdbx_PDB_ins_code 
_atom_site.Cartn_x 
_atom_site.Cartn_y 
_atom_site.Cartn_z 
_atom_site.occupancy 
_atom_site.B_iso_or_equiv 
_atom_site.pdbx_formal_charge 
_atom_site.auth_seq_id 
_atom_site.auth_comp_id 
_atom_site.auth_asym_id 
_atom_site.auth_atom_id 
_atom_site.pdbx_PDB_model_num 
HETATM 1   N  N1    . 5CM A 1 1 ? 15.300 17.856 18.978 1.00 5.29  ? 1  5CM A N1    1 
HETATM 2   C  C2    . 5CM A 1 1 ? 13.936 17.644 18.769 1.00 5.46  ? 1  5CM A C2    1 
HETATM 3   N  N3    . 5CM A 1 1 ? 13.198 18.750 18.673 1.00 6.23  ? 1  5CM A N3    1 
HETATM 4   C  C4    . 5CM A 1 1 ? 13.771 20.037 18.734 1.00 5.07  ? 1  5CM A C4    1 
HETATM 5   C  C5    . 5CM A 1 1 ? 15.159 20.247 19.018 1.00 5.64  ? 1  5CM A C5    1 
HETATM 6   C  C5A   . 5CM A 1 1 ? 15.684 21.633 19.149 1.00 5.20  ? 1  5CM A C5A   1 
HETATM 7   C  C6    . 5CM A 1 1 ? 15.819 19.097 19.141 1.00 6.05  ? 1  5CM A C6    1 
HETATM 8   O  O2    . 5CM A 1 1 ? 13.363 16.538 18.636 1.00 5.70  ? 1  5CM A O2    1 
HETATM 9   N  N4    . 5CM A 1 1 ? 12.922 21.133 18.620 1.00 6.31  ? 1  5CM A N4    1 
HETATM 10  C  "C1'" . 5CM A 1 1 ? 16.101 16.621 19.183 1.00 6.78  ? 1  5CM A "C1'" 1 
HETATM 11  C  "C2'" . 5CM A 1 1 ? 16.529 16.137 17.779 1.00 7.98  ? 1  5CM A "C2'" 1 
HETATM 12  C  "C3'" . 5CM A 1 1 ? 17.754 15.266 18.331 1.00 9.97  ? 1  5CM A "C3'" 1 
HETATM 13  C  "C4'" . 5CM A 1 1 ? 18.390 15.972 19.485 1.00 8.88  ? 1  5CM A "C4'" 1 
HETATM 14  O  "O4'" . 5CM A 1 1 ? 17.194 16.845 19.942 1.00 8.12  ? 1  5CM A "O4'" 1 
HETATM 15  O  "O3'" . 5CM A 1 1 ? 17.274 14.012 18.713 1.00 12.29 ? 1  5CM A "O3'" 1 
HETATM 16  C  "C5'" . 5CM A 1 1 ? 19.585 16.850 19.270 1.00 9.20  ? 1  5CM A "C5'" 1 
HETATM 17  O  "O5'" . 5CM A 1 1 ? 19.304 17.969 18.403 1.00 8.45  ? 1  5CM A "O5'" 1 
ATOM   18  P  P     . DG  A 1 2 ? 18.289 12.725 18.600 1.00 14.02 ? 2  DG  A P     1 
ATOM   19  O  OP1   . DG  A 1 2 ? 19.187 13.047 17.587 1.00 10.92 ? 2  DG  A OP1   1 
ATOM   20  O  OP2   . DG  A 1 2 ? 17.247 11.693 18.838 1.00 13.54 ? 2  DG  A OP2   1 
ATOM   21  O  "O5'" . DG  A 1 2 ? 19.416 12.954 19.690 1.00 9.87  ? 2  DG  A "O5'" 1 
ATOM   22  C  "C5'" . DG  A 1 2 ? 19.041 12.648 20.946 1.00 10.91 ? 2  DG  A "C5'" 1 
ATOM   23  C  "C4'" . DG  A 1 2 ? 20.262 12.680 21.745 1.00 12.27 ? 2  DG  A "C4'" 1 
ATOM   24  O  "O4'" . DG  A 1 2 ? 20.604 14.051 21.665 1.00 9.94  ? 2  DG  A "O4'" 1 
ATOM   25  C  "C3'" . DG  A 1 2 ? 19.731 12.508 23.283 1.00 13.10 ? 2  DG  A "C3'" 1 
ATOM   26  O  "O3'" . DG  A 1 2 ? 19.973 11.143 23.580 1.00 15.32 ? 2  DG  A "O3'" 1 
ATOM   27  C  "C2'" . DG  A 1 2 ? 20.439 13.444 24.142 1.00 10.61 ? 2  DG  A "C2'" 1 
ATOM   28  C  "C1'" . DG  A 1 2 ? 20.841 14.601 23.042 1.00 10.42 ? 2  DG  A "C1'" 1 
ATOM   29  N  N9    . DG  A 1 2 ? 20.242 15.782 23.101 1.00 9.80  ? 2  DG  A N9    1 
ATOM   30  C  C8    . DG  A 1 2 ? 20.876 16.970 23.149 1.00 8.38  ? 2  DG  A C8    1 
ATOM   31  N  N7    . DG  A 1 2 ? 20.056 18.047 23.228 1.00 8.95  ? 2  DG  A N7    1 
ATOM   32  C  C5    . DG  A 1 2 ? 18.813 17.433 23.072 1.00 9.00  ? 2  DG  A C5    1 
ATOM   33  C  C6    . DG  A 1 2 ? 17.486 18.040 23.076 1.00 8.55  ? 2  DG  A C6    1 
ATOM   34  O  O6    . DG  A 1 2 ? 17.280 19.286 23.077 1.00 7.98  ? 2  DG  A O6    1 
ATOM   35  N  N1    . DG  A 1 2 ? 16.485 17.140 22.948 1.00 7.11  ? 2  DG  A N1    1 
ATOM   36  C  C2    . DG  A 1 2 ? 16.719 15.859 22.838 1.00 7.81  ? 2  DG  A C2    1 
ATOM   37  N  N2    . DG  A 1 2 ? 15.732 15.100 22.721 1.00 6.16  ? 2  DG  A N2    1 
ATOM   38  N  N3    . DG  A 1 2 ? 17.814 15.208 22.880 1.00 10.07 ? 2  DG  A N3    1 
ATOM   39  C  C4    . DG  A 1 2 ? 18.856 16.079 22.985 1.00 8.31  ? 2  DG  A C4    1 
ATOM   40  P  P     . DU  A 1 3 ? 18.772 10.100 24.168 1.00 20.73 ? 3  DU  A P     1 
ATOM   41  O  OP1   . DU  A 1 3 ? 19.812 9.010  24.472 1.00 19.95 ? 3  DU  A OP1   1 
ATOM   42  O  OP2   . DU  A 1 3 ? 17.981 9.962  22.886 1.00 18.04 ? 3  DU  A OP2   1 
ATOM   43  O  "O5'" . DU  A 1 3 ? 17.938 10.685 25.419 1.00 15.72 ? 3  DU  A "O5'" 1 
ATOM   44  C  "C5'" . DU  A 1 3 ? 17.427 9.727  26.372 1.00 13.22 ? 3  DU  A "C5'" 1 
ATOM   45  C  "C4'" . DU  A 1 3 ? 16.224 10.579 26.658 1.00 10.88 ? 3  DU  A "C4'" 1 
ATOM   46  O  "O4'" . DU  A 1 3 ? 16.496 11.923 27.096 1.00 9.53  ? 3  DU  A "O4'" 1 
ATOM   47  C  "C3'" . DU  A 1 3 ? 15.448 10.824 25.372 1.00 11.62 ? 3  DU  A "C3'" 1 
ATOM   48  O  "O3'" . DU  A 1 3 ? 14.161 10.360 25.741 1.00 13.79 ? 3  DU  A "O3'" 1 
ATOM   49  C  "C2'" . DU  A 1 3 ? 15.571 12.303 24.944 1.00 9.53  ? 3  DU  A "C2'" 1 
ATOM   50  C  "C1'" . DU  A 1 3 ? 15.645 12.809 26.526 1.00 7.53  ? 3  DU  A "C1'" 1 
ATOM   51  N  N1    . DU  A 1 3 ? 16.445 14.089 26.542 1.00 8.10  ? 3  DU  A N1    1 
ATOM   52  C  C2    . DU  A 1 3 ? 15.693 15.204 26.462 1.00 6.72  ? 3  DU  A C2    1 
ATOM   53  O  O2    . DU  A 1 3 ? 14.445 15.166 26.363 1.00 9.98  ? 3  DU  A O2    1 
ATOM   54  N  N3    . DU  A 1 3 ? 16.323 16.398 26.390 1.00 6.87  ? 3  DU  A N3    1 
ATOM   55  C  C4    . DU  A 1 3 ? 17.644 16.563 26.530 1.00 5.14  ? 3  DU  A C4    1 
ATOM   56  O  O4    . DU  A 1 3 ? 18.128 17.738 26.419 1.00 5.85  ? 3  DU  A O4    1 
ATOM   57  C  C5    . DU  A 1 3 ? 18.430 15.408 26.588 1.00 7.52  ? 3  DU  A C5    1 
ATOM   58  C  C6    . DU  A 1 3 ? 17.810 14.223 26.646 1.00 7.58  ? 3  DU  A C6    1 
ATOM   59  P  P     . DA  A 1 4 ? 13.779 8.743  25.558 1.00 15.81 ? 4  DA  A P     1 
ATOM   60  O  OP1   . DA  A 1 4 ? 14.616 8.099  24.609 1.00 15.38 ? 4  DA  A OP1   1 
ATOM   61  O  OP2   . DA  A 1 4 ? 12.369 8.836  25.201 1.00 15.91 ? 4  DA  A OP2   1 
ATOM   62  O  "O5'" . DA  A 1 4 ? 14.139 7.950  26.912 1.00 14.95 ? 4  DA  A "O5'" 1 
ATOM   63  C  "C5'" . DA  A 1 4 ? 13.644 8.426  28.196 1.00 10.88 ? 4  DA  A "C5'" 1 
ATOM   64  C  "C4'" . DA  A 1 4 ? 14.331 7.538  29.167 1.00 9.97  ? 4  DA  A "C4'" 1 
ATOM   65  O  "O4'" . DA  A 1 4 ? 15.693 7.726  28.960 1.00 8.54  ? 4  DA  A "O4'" 1 
ATOM   66  C  "C3'" . DA  A 1 4 ? 14.044 7.941  30.617 1.00 8.81  ? 4  DA  A "C3'" 1 
ATOM   67  O  "O3'" . DA  A 1 4 ? 12.863 7.073  30.739 1.00 10.76 ? 4  DA  A "O3'" 1 
ATOM   68  C  "C2'" . DA  A 1 4 ? 15.350 7.734  31.310 1.00 8.40  ? 4  DA  A "C2'" 1 
ATOM   69  C  "C1'" . DA  A 1 4 ? 16.490 7.779  30.295 1.00 8.45  ? 4  DA  A "C1'" 1 
ATOM   70  N  N9    . DA  A 1 4 ? 17.271 8.968  30.218 1.00 6.75  ? 4  DA  A N9    1 
ATOM   71  C  C8    . DA  A 1 4 ? 18.566 9.012  30.092 1.00 6.72  ? 4  DA  A C8    1 
ATOM   72  N  N7    . DA  A 1 4 ? 19.079 10.264 30.036 1.00 7.53  ? 4  DA  A N7    1 
ATOM   73  C  C5    . DA  A 1 4 ? 17.935 11.005 30.115 1.00 6.43  ? 4  DA  A C5    1 
ATOM   74  C  C6    . DA  A 1 4 ? 17.769 12.452 30.067 1.00 6.15  ? 4  DA  A C6    1 
ATOM   75  N  N6    . DA  A 1 4 ? 18.891 13.280 29.845 1.00 6.88  ? 4  DA  A N6    1 
ATOM   76  N  N1    . DA  A 1 4 ? 16.566 12.964 30.155 1.00 6.29  ? 4  DA  A N1    1 
ATOM   77  C  C2    . DA  A 1 4 ? 15.529 12.119 30.281 1.00 5.08  ? 4  DA  A C2    1 
ATOM   78  N  N3    . DA  A 1 4 ? 15.575 10.779 30.331 1.00 6.31  ? 4  DA  A N3    1 
ATOM   79  C  C4    . DA  A 1 4 ? 16.845 10.273 30.235 1.00 7.45  ? 4  DA  A C4    1 
HETATM 80  N  N1    . 5CM A 1 5 ? 14.505 11.809 33.864 1.00 2.00  ? 5  5CM A N1    1 
HETATM 81  C  C2    . 5CM A 1 5 ? 14.965 13.082 33.731 1.00 2.00  ? 5  5CM A C2    1 
HETATM 82  N  N3    . 5CM A 1 5 ? 16.327 13.182 33.688 1.00 2.00  ? 5  5CM A N3    1 
HETATM 83  C  C4    . 5CM A 1 5 ? 17.172 12.086 33.621 1.00 2.00  ? 5  5CM A C4    1 
HETATM 84  C  C5    . 5CM A 1 5 ? 16.574 10.814 33.801 1.00 2.00  ? 5  5CM A C5    1 
HETATM 85  C  C5A   . 5CM A 1 5 ? 17.475 9.572  33.838 1.00 2.59  ? 5  5CM A C5A   1 
HETATM 86  C  C6    . 5CM A 1 5 ? 15.267 10.686 33.922 1.00 2.00  ? 5  5CM A C6    1 
HETATM 87  O  O2    . 5CM A 1 5 ? 14.288 14.047 33.758 1.00 3.83  ? 5  5CM A O2    1 
HETATM 88  N  N4    . 5CM A 1 5 ? 18.496 12.353 33.516 1.00 2.00  ? 5  5CM A N4    1 
HETATM 89  C  "C1'" . 5CM A 1 5 ? 12.989 11.647 33.987 1.00 3.54  ? 5  5CM A "C1'" 1 
HETATM 90  C  "C2'" . 5CM A 1 5 ? 12.289 11.763 32.616 1.00 4.89  ? 5  5CM A "C2'" 1 
HETATM 91  C  "C3'" . 5CM A 1 5 ? 11.064 11.082 33.045 1.00 6.93  ? 5  5CM A "C3'" 1 
HETATM 92  C  "C4'" . 5CM A 1 5 ? 11.202 10.119 34.266 1.00 6.20  ? 5  5CM A "C4'" 1 
HETATM 93  O  "O4'" . 5CM A 1 5 ? 12.579 10.434 34.530 1.00 4.24  ? 5  5CM A "O4'" 1 
HETATM 94  O  "O3'" . 5CM A 1 5 ? 10.193 12.182 33.467 1.00 10.54 ? 5  5CM A "O3'" 1 
HETATM 95  C  "C5'" . 5CM A 1 5 ? 11.164 8.611  34.049 1.00 7.21  ? 5  5CM A "C5'" 1 
HETATM 96  O  "O5'" . 5CM A 1 5 ? 12.032 8.580  32.795 1.00 10.54 ? 5  5CM A "O5'" 1 
HETATM 97  P  P     . 5CM A 1 5 ? 12.146 7.060  32.186 1.00 12.97 ? 5  5CM A P     1 
HETATM 98  O  OP1   . 5CM A 1 5 ? 13.264 6.595  32.953 1.00 16.02 ? 5  5CM A OP1   1 
HETATM 99  O  OP2   . 5CM A 1 5 ? 10.829 6.401  31.881 1.00 14.50 ? 5  5CM A OP2   1 
ATOM   100 P  P     . DG  A 1 6 ? 8.598  12.036 33.252 1.00 11.67 ? 6  DG  A P     1 
ATOM   101 O  OP1   . DG  A 1 6 ? 8.308  11.427 32.019 1.00 11.60 ? 6  DG  A OP1   1 
ATOM   102 O  OP2   . DG  A 1 6 ? 8.182  13.450 33.607 1.00 12.49 ? 6  DG  A OP2   1 
ATOM   103 O  "O5'" . DG  A 1 6 ? 8.142  10.772 34.254 1.00 11.36 ? 6  DG  A "O5'" 1 
ATOM   104 C  "C5'" . DG  A 1 6 ? 8.229  11.241 35.648 1.00 9.43  ? 6  DG  A "C5'" 1 
ATOM   105 C  "C4'" . DG  A 1 6 ? 7.447  10.010 36.292 1.00 9.66  ? 6  DG  A "C4'" 1 
ATOM   106 O  "O4'" . DG  A 1 6 ? 8.414  8.982  36.266 1.00 9.15  ? 6  DG  A "O4'" 1 
ATOM   107 C  "C3'" . DG  A 1 6 ? 7.066  10.450 37.580 1.00 8.50  ? 6  DG  A "C3'" 1 
ATOM   108 O  "O3'" . DG  A 1 6 ? 6.022  9.559  38.098 1.00 11.06 ? 6  DG  A "O3'" 1 
ATOM   109 C  "C2'" . DG  A 1 6 ? 8.215  9.965  38.297 1.00 6.81  ? 6  DG  A "C2'" 1 
ATOM   110 C  "C1'" . DG  A 1 6 ? 8.840  8.801  37.586 1.00 6.56  ? 6  DG  A "C1'" 1 
ATOM   111 N  N9    . DG  A 1 6 ? 10.317 8.664  37.554 1.00 5.93  ? 6  DG  A N9    1 
ATOM   112 C  C8    . DG  A 1 6 ? 10.874 7.485  37.485 1.00 4.61  ? 6  DG  A C8    1 
ATOM   113 N  N7    . DG  A 1 6 ? 12.196 7.567  37.502 1.00 4.59  ? 6  DG  A N7    1 
ATOM   114 C  C5    . DG  A 1 6 ? 12.434 8.991  37.497 1.00 4.93  ? 6  DG  A C5    1 
ATOM   115 C  C6    . DG  A 1 6 ? 13.638 9.712  37.402 1.00 4.74  ? 6  DG  A C6    1 
ATOM   116 O  O6    . DG  A 1 6 ? 14.816 9.267  37.261 1.00 4.99  ? 6  DG  A O6    1 
ATOM   117 N  N1    . DG  A 1 6 ? 13.539 11.095 37.481 1.00 5.00  ? 6  DG  A N1    1 
ATOM   118 C  C2    . DG  A 1 6 ? 12.339 11.588 37.383 1.00 4.98  ? 6  DG  A C2    1 
ATOM   119 N  N2    . DG  A 1 6 ? 12.254 12.890 37.406 1.00 3.50  ? 6  DG  A N2    1 
ATOM   120 N  N3    . DG  A 1 6 ? 11.108 11.008 37.586 1.00 5.57  ? 6  DG  A N3    1 
ATOM   121 C  C4    . DG  A 1 6 ? 11.294 9.648  37.525 1.00 5.08  ? 6  DG  A C4    1 
HETATM 122 N  N1    . 5CM B 1 1 ? 16.788 14.829 36.888 1.00 3.58  ? 7  5CM B N1    1 
HETATM 123 C  C2    . 5CM B 1 1 ? 15.632 14.033 37.088 1.00 4.76  ? 7  5CM B C2    1 
HETATM 124 N  N3    . 5CM B 1 1 ? 15.895 12.673 37.149 1.00 4.11  ? 7  5CM B N3    1 
HETATM 125 C  C4    . 5CM B 1 1 ? 17.146 12.152 37.098 1.00 4.52  ? 7  5CM B C4    1 
HETATM 126 C  C5    . 5CM B 1 1 ? 18.282 12.988 37.001 1.00 4.28  ? 7  5CM B C5    1 
HETATM 127 C  C5A   . 5CM B 1 1 ? 19.652 12.415 36.818 1.00 3.85  ? 7  5CM B C5A   1 
HETATM 128 C  C6    . 5CM B 1 1 ? 18.046 14.310 36.962 1.00 4.53  ? 7  5CM B C6    1 
HETATM 129 O  O2    . 5CM B 1 1 ? 14.480 14.433 37.196 1.00 6.13  ? 7  5CM B O2    1 
HETATM 130 N  N4    . 5CM B 1 1 ? 17.282 10.821 37.193 1.00 5.62  ? 7  5CM B N4    1 
HETATM 131 C  "C1'" . 5CM B 1 1 ? 16.390 16.313 36.885 1.00 5.51  ? 7  5CM B "C1'" 1 
HETATM 132 C  "C2'" . 5CM B 1 1 ? 16.440 16.920 38.215 1.00 3.40  ? 7  5CM B "C2'" 1 
HETATM 133 C  "C3'" . 5CM B 1 1 ? 16.760 18.456 37.828 1.00 5.75  ? 7  5CM B "C3'" 1 
HETATM 134 C  "C4'" . 5CM B 1 1 ? 17.705 18.399 36.657 1.00 6.43  ? 7  5CM B "C4'" 1 
HETATM 135 O  "O4'" . 5CM B 1 1 ? 17.480 16.982 36.301 1.00 6.57  ? 7  5CM B "O4'" 1 
HETATM 136 O  "O3'" . 5CM B 1 1 ? 15.544 19.068 37.582 1.00 6.05  ? 7  5CM B "O3'" 1 
HETATM 137 C  "C5'" . 5CM B 1 1 ? 19.206 18.734 36.817 1.00 6.80  ? 7  5CM B "C5'" 1 
HETATM 138 O  "O5'" . 5CM B 1 1 ? 19.757 17.978 37.909 1.00 8.42  ? 7  5CM B "O5'" 1 
ATOM   139 P  P     . DG  B 1 2 ? 15.313 20.573 37.557 1.00 7.88  ? 8  DG  B P     1 
ATOM   140 O  OP1   . DG  B 1 2 ? 15.890 21.046 38.783 1.00 8.78  ? 8  DG  B OP1   1 
ATOM   141 O  OP2   . DG  B 1 2 ? 13.922 20.745 37.444 1.00 9.20  ? 8  DG  B OP2   1 
ATOM   142 O  "O5'" . DG  B 1 2 ? 15.903 21.298 36.239 1.00 6.88  ? 8  DG  B "O5'" 1 
ATOM   143 C  "C5'" . DG  B 1 2 ? 15.411 20.984 34.948 1.00 5.62  ? 8  DG  B "C5'" 1 
ATOM   144 C  "C4'" . DG  B 1 2 ? 16.491 21.670 34.114 1.00 5.23  ? 8  DG  B "C4'" 1 
ATOM   145 O  "O4'" . DG  B 1 2 ? 17.796 21.210 34.263 1.00 3.49  ? 8  DG  B "O4'" 1 
ATOM   146 C  "C3'" . DG  B 1 2 ? 16.021 21.254 32.574 1.00 4.48  ? 8  DG  B "C3'" 1 
ATOM   147 O  "O3'" . DG  B 1 2 ? 15.200 22.360 32.262 1.00 8.66  ? 8  DG  B "O3'" 1 
ATOM   148 C  "C2'" . DG  B 1 2 ? 17.280 21.131 31.871 1.00 4.62  ? 8  DG  B "C2'" 1 
ATOM   149 C  "C1'" . DG  B 1 2 ? 18.252 20.900 32.865 1.00 4.60  ? 8  DG  B "C1'" 1 
ATOM   150 N  N9    . DG  B 1 2 ? 18.828 19.616 32.932 1.00 4.54  ? 8  DG  B N9    1 
ATOM   151 C  C8    . DG  B 1 2 ? 20.112 19.277 32.878 1.00 4.77  ? 8  DG  B C8    1 
ATOM   152 N  N7    . DG  B 1 2 ? 20.274 17.910 33.034 1.00 3.80  ? 8  DG  B N7    1 
ATOM   153 C  C5    . DG  B 1 2 ? 18.983 17.448 33.067 1.00 4.62  ? 8  DG  B C5    1 
ATOM   154 C  C6    . DG  B 1 2 ? 18.559 16.086 33.240 1.00 4.84  ? 8  DG  B C6    1 
ATOM   155 O  O6    . DG  B 1 2 ? 19.350 15.099 33.197 1.00 3.80  ? 8  DG  B O6    1 
ATOM   156 N  N1    . DG  B 1 2 ? 17.232 15.848 33.333 1.00 4.17  ? 8  DG  B N1    1 
ATOM   157 C  C2    . DG  B 1 2 ? 16.390 16.919 33.333 1.00 4.72  ? 8  DG  B C2    1 
ATOM   158 N  N2    . DG  B 1 2 ? 15.143 16.734 33.433 1.00 3.50  ? 8  DG  B N2    1 
ATOM   159 N  N3    . DG  B 1 2 ? 16.693 18.230 33.183 1.00 4.76  ? 8  DG  B N3    1 
ATOM   160 C  C4    . DG  B 1 2 ? 18.034 18.408 33.109 1.00 5.38  ? 8  DG  B C4    1 
ATOM   161 P  P     . DU  B 1 3 ? 13.679 22.401 31.867 1.00 5.97  ? 9  DU  B P     1 
ATOM   162 O  OP1   . DU  B 1 3 ? 13.266 23.851 31.630 1.00 9.50  ? 9  DU  B OP1   1 
ATOM   163 O  OP2   . DU  B 1 3 ? 12.900 21.969 32.933 1.00 10.28 ? 9  DU  B OP2   1 
ATOM   164 O  "O5'" . DU  B 1 3 ? 13.595 21.409 30.663 1.00 6.64  ? 9  DU  B "O5'" 1 
ATOM   165 C  "C5'" . DU  B 1 3 ? 12.784 21.458 29.580 1.00 6.38  ? 9  DU  B "C5'" 1 
ATOM   166 C  "C4'" . DU  B 1 3 ? 12.181 20.023 29.483 1.00 6.91  ? 9  DU  B "C4'" 1 
ATOM   167 O  "O4'" . DU  B 1 3 ? 13.179 19.075 28.932 1.00 6.85  ? 9  DU  B "O4'" 1 
ATOM   168 C  "C3'" . DU  B 1 3 ? 11.641 19.222 30.682 1.00 7.07  ? 9  DU  B "C3'" 1 
ATOM   169 O  "O3'" . DU  B 1 3 ? 10.531 18.556 30.270 1.00 7.61  ? 9  DU  B "O3'" 1 
ATOM   170 C  "C2'" . DU  B 1 3 ? 12.745 18.275 31.123 1.00 6.46  ? 9  DU  B "C2'" 1 
ATOM   171 C  "C1'" . DU  B 1 3 ? 13.172 17.906 29.621 1.00 8.58  ? 9  DU  B "C1'" 1 
ATOM   172 N  N1    . DU  B 1 3 ? 14.735 17.539 29.686 1.00 7.69  ? 9  DU  B N1    1 
ATOM   173 C  C2    . DU  B 1 3 ? 14.909 16.239 29.819 1.00 6.90  ? 9  DU  B C2    1 
ATOM   174 O  O2    . DU  B 1 3 ? 14.012 15.470 29.872 1.00 9.32  ? 9  DU  B O2    1 
ATOM   175 N  N3    . DU  B 1 3 ? 16.213 15.861 29.835 1.00 7.97  ? 9  DU  B N3    1 
ATOM   176 C  C4    . DU  B 1 3 ? 17.264 16.670 29.767 1.00 6.96  ? 9  DU  B C4    1 
ATOM   177 O  O4    . DU  B 1 3 ? 18.346 16.101 29.882 1.00 6.25  ? 9  DU  B O4    1 
ATOM   178 C  C5    . DU  B 1 3 ? 17.003 18.063 29.606 1.00 5.90  ? 9  DU  B C5    1 
ATOM   179 C  C6    . DU  B 1 3 ? 15.770 18.508 29.517 1.00 7.87  ? 9  DU  B C6    1 
ATOM   180 P  P     . DA  B 1 4 ? 9.006  19.083 30.243 1.00 9.26  ? 10 DA  B P     1 
ATOM   181 O  OP1   . DA  B 1 4 ? 8.808  19.935 31.417 1.00 7.26  ? 10 DA  B OP1   1 
ATOM   182 O  OP2   . DA  B 1 4 ? 8.203  18.037 29.863 1.00 8.98  ? 10 DA  B OP2   1 
ATOM   183 O  "O5'" . DA  B 1 4 ? 8.862  20.023 28.857 1.00 7.28  ? 10 DA  B "O5'" 1 
ATOM   184 C  "C5'" . DA  B 1 4 ? 8.610  19.534 27.516 1.00 8.46  ? 10 DA  B "C5'" 1 
ATOM   185 C  "C4'" . DA  B 1 4 ? 8.679  20.701 26.694 1.00 8.61  ? 10 DA  B "C4'" 1 
ATOM   186 O  "O4'" . DA  B 1 4 ? 9.864  21.519 26.945 1.00 10.40 ? 10 DA  B "O4'" 1 
ATOM   187 C  "C3'" . DA  B 1 4 ? 8.867  20.386 25.251 1.00 9.19  ? 10 DA  B "C3'" 1 
ATOM   188 O  "O3'" . DA  B 1 4 ? 7.652  20.684 24.639 1.00 11.28 ? 10 DA  B "O3'" 1 
ATOM   189 C  "C2'" . DA  B 1 4 ? 10.000 21.145 24.675 1.00 9.90  ? 10 DA  B "C2'" 1 
ATOM   190 C  "C1'" . DA  B 1 4 ? 10.629 21.976 25.861 1.00 7.96  ? 10 DA  B "C1'" 1 
ATOM   191 N  N9    . DA  B 1 4 ? 11.970 21.660 25.927 1.00 7.23  ? 10 DA  B N9    1 
ATOM   192 C  C8    . DA  B 1 4 ? 12.893 22.663 26.095 1.00 6.42  ? 10 DA  B C8    1 
ATOM   193 N  N7    . DA  B 1 4 ? 14.151 22.200 26.200 1.00 6.99  ? 10 DA  B N7    1 
ATOM   194 C  C5    . DA  B 1 4 ? 14.011 20.830 25.980 1.00 6.86  ? 10 DA  B C5    1 
ATOM   195 C  C6    . DA  B 1 4 ? 14.962 19.766 26.073 1.00 6.70  ? 10 DA  B C6    1 
ATOM   196 N  N6    . DA  B 1 4 ? 16.301 20.085 26.221 1.00 9.22  ? 10 DA  B N6    1 
ATOM   197 N  N1    . DA  B 1 4 ? 14.515 18.503 25.847 1.00 7.25  ? 10 DA  B N1    1 
ATOM   198 C  C2    . DA  B 1 4 ? 13.226 18.255 25.628 1.00 5.68  ? 10 DA  B C2    1 
ATOM   199 N  N3    . DA  B 1 4 ? 12.215 19.206 25.588 1.00 5.32  ? 10 DA  B N3    1 
ATOM   200 C  C4    . DA  B 1 4 ? 12.665 20.440 25.799 1.00 7.64  ? 10 DA  B C4    1 
HETATM 201 N  N1    . 5CM B 1 5 ? 11.649 18.129 21.965 1.00 7.33  ? 11 5CM B N1    1 
HETATM 202 C  C2    . 5CM B 1 5 ? 12.844 17.505 22.314 1.00 5.21  ? 11 5CM B C2    1 
HETATM 203 N  N3    . 5CM B 1 5 ? 13.887 18.410 22.384 1.00 6.44  ? 11 5CM B N3    1 
HETATM 204 C  C4    . 5CM B 1 5 ? 13.820 19.790 22.267 1.00 5.40  ? 11 5CM B C4    1 
HETATM 205 C  C5    . 5CM B 1 5 ? 12.495 20.294 22.086 1.00 5.57  ? 11 5CM B C5    1 
HETATM 206 C  C5A   . 5CM B 1 5 ? 12.199 21.740 22.074 1.00 3.43  ? 11 5CM B C5A   1 
HETATM 207 C  C6    . 5CM B 1 5 ? 11.473 19.499 21.874 1.00 5.79  ? 11 5CM B C6    1 
HETATM 208 O  O2    . 5CM B 1 5 ? 13.095 16.323 22.222 1.00 4.89  ? 11 5CM B O2    1 
HETATM 209 N  N4    . 5CM B 1 5 ? 14.974 20.488 22.482 1.00 5.52  ? 11 5CM B N4    1 
HETATM 210 C  "C1'" . 5CM B 1 5 ? 10.582 17.132 21.852 1.00 6.13  ? 11 5CM B "C1'" 1 
HETATM 211 C  "C2'" . 5CM B 1 5 ? 9.911  16.773 23.267 1.00 8.53  ? 11 5CM B "C2'" 1 
HETATM 212 C  "C3'" . 5CM B 1 5 ? 8.610  16.226 22.828 1.00 10.22 ? 11 5CM B "C3'" 1 
HETATM 213 C  "C4'" . 5CM B 1 5 ? 8.258  17.056 21.582 1.00 9.59  ? 11 5CM B "C4'" 1 
HETATM 214 O  "O4'" . 5CM B 1 5 ? 9.538  17.707 21.247 1.00 9.90  ? 11 5CM B "O4'" 1 
HETATM 215 O  "O3'" . 5CM B 1 5 ? 8.703  14.872 22.440 1.00 11.83 ? 11 5CM B "O3'" 1 
HETATM 216 C  "C5'" . 5CM B 1 5 ? 7.329  18.173 21.833 1.00 12.02 ? 11 5CM B "C5'" 1 
HETATM 217 O  "O5'" . 5CM B 1 5 ? 7.641  19.093 22.736 1.00 11.79 ? 11 5CM B "O5'" 1 
HETATM 218 P  P     . 5CM B 1 5 ? 6.672  19.692 23.803 1.00 12.65 ? 11 5CM B P     1 
HETATM 219 O  OP1   . 5CM B 1 5 ? 5.542  20.532 23.140 1.00 12.87 ? 11 5CM B OP1   1 
HETATM 220 O  OP2   . 5CM B 1 5 ? 6.280  18.728 24.864 1.00 12.98 ? 11 5CM B OP2   1 
ATOM   221 P  P     . DG  B 1 6 ? 7.403  13.951 22.628 1.00 14.94 ? 12 DG  B P     1 
ATOM   222 O  OP1   . DG  B 1 6 ? 6.747  14.213 23.873 1.00 13.60 ? 12 DG  B OP1   1 
ATOM   223 O  OP2   . DG  B 1 6 ? 7.951  12.631 22.290 1.00 16.41 ? 12 DG  B OP2   1 
ATOM   224 O  "O5'" . DG  B 1 6 ? 6.578  13.953 21.170 1.00 12.59 ? 12 DG  B "O5'" 1 
ATOM   225 C  "C5'" . DG  B 1 6 ? 5.351  14.538 21.069 1.00 12.65 ? 12 DG  B "C5'" 1 
ATOM   226 C  "C4'" . DG  B 1 6 ? 4.984  14.981 19.645 1.00 11.16 ? 12 DG  B "C4'" 1 
ATOM   227 O  "O4'" . DG  B 1 6 ? 5.510  16.218 19.658 1.00 9.08  ? 12 DG  B "O4'" 1 
ATOM   228 C  "C3'" . DG  B 1 6 ? 5.747  14.535 18.406 1.00 11.33 ? 12 DG  B "C3'" 1 
ATOM   229 O  "O3'" . DG  B 1 6 ? 4.782  13.825 17.851 1.00 15.39 ? 12 DG  B "O3'" 1 
ATOM   230 C  "C2'" . DG  B 1 6 ? 5.850  15.592 17.396 1.00 8.75  ? 12 DG  B "C2'" 1 
ATOM   231 C  "C1'" . DG  B 1 6 ? 5.510  16.760 18.321 1.00 8.80  ? 12 DG  B "C1'" 1 
ATOM   232 N  N9    . DG  B 1 6 ? 6.383  17.848 18.285 1.00 7.28  ? 12 DG  B N9    1 
ATOM   233 C  C8    . DG  B 1 6 ? 6.050  19.132 18.255 1.00 7.76  ? 12 DG  B C8    1 
ATOM   234 N  N7    . DG  B 1 6 ? 7.161  19.908 18.279 1.00 8.34  ? 12 DG  B N7    1 
ATOM   235 C  C5    . DG  B 1 6 ? 8.227  19.031 18.348 1.00 8.08  ? 12 DG  B C5    1 
ATOM   236 C  C6    . DG  B 1 6 ? 9.643  19.296 18.299 1.00 8.79  ? 12 DG  B C6    1 
ATOM   237 O  O6    . DG  B 1 6 ? 10.098 20.499 18.303 1.00 7.44  ? 12 DG  B O6    1 
ATOM   238 N  N1    . DG  B 1 6 ? 10.496 18.197 18.279 1.00 5.88  ? 12 DG  B N1    1 
ATOM   239 C  C2    . DG  B 1 6 ? 9.851  17.058 18.311 1.00 6.12  ? 12 DG  B C2    1 
ATOM   240 N  N2    . DG  B 1 6 ? 10.512 15.952 18.352 1.00 8.54  ? 12 DG  B N2    1 
ATOM   241 N  N3    . DG  B 1 6 ? 8.615  16.667 18.257 1.00 7.97  ? 12 DG  B N3    1 
ATOM   242 C  C4    . DG  B 1 6 ? 7.800  17.731 18.283 1.00 7.48  ? 12 DG  B C4    1 
HETATM 243 MG MG    . MG  C 2 . ? 11.294 22.267 34.031 1.00 14.93 ? 13 MG  B MG    1 
HETATM 244 MG MG    . MG  D 2 . ? 21.592 18.745 28.471 1.00 24.79 ? 14 MG  B MG    1 
HETATM 245 O  O     . HOH E 3 . ? 23.391 10.133 25.706 1.00 25.97 ? 16 HOH A O     1 
HETATM 246 O  O     . HOH E 3 . ? 15.585 12.066 21.882 1.00 27.73 ? 17 HOH A O     1 
HETATM 247 O  O     . HOH E 3 . ? 9.676  14.678 36.226 1.00 15.99 ? 18 HOH A O     1 
HETATM 248 O  O     . HOH E 3 . ? 21.277 11.141 33.978 1.00 14.11 ? 19 HOH A O     1 
HETATM 249 O  O     . HOH E 3 . ? 20.379 11.168 25.457 1.00 13.61 ? 20 HOH A O     1 
HETATM 250 O  O     . HOH E 3 . ? 20.554 6.727  25.960 1.00 38.17 ? 21 HOH A O     1 
HETATM 251 O  O     . HOH E 3 . ? 8.650  3.765  32.224 1.00 27.34 ? 24 HOH A O     1 
HETATM 252 O  O     . HOH E 3 . ? 17.218 6.207  26.828 1.00 12.29 ? 26 HOH A O     1 
HETATM 253 O  O     . HOH E 3 . ? 20.195 20.459 19.175 1.00 17.80 ? 27 HOH A O     1 
HETATM 254 O  O     . HOH E 3 . ? 13.053 24.014 19.108 1.00 8.38  ? 29 HOH A O     1 
HETATM 255 O  O     . HOH E 3 . ? 20.404 16.389 15.791 1.00 16.24 ? 33 HOH A O     1 
HETATM 256 O  O     . HOH E 3 . ? 12.508 11.226 29.472 1.00 36.02 ? 34 HOH A O     1 
HETATM 257 O  O     . HOH E 3 . ? 10.426 5.452  28.613 1.00 17.20 ? 36 HOH A O     1 
HETATM 258 O  O     . HOH E 3 . ? 19.356 21.089 21.730 1.00 21.06 ? 37 HOH A O     1 
HETATM 259 O  O     . HOH E 3 . ? 9.206  9.774  29.330 1.00 25.25 ? 38 HOH A O     1 
HETATM 260 O  O     . HOH E 3 . ? 21.029 10.438 32.460 1.00 19.54 ? 39 HOH A O     1 
HETATM 261 O  O     . HOH E 3 . ? 22.868 12.827 34.525 1.00 22.20 ? 40 HOH A O     1 
HETATM 262 O  O     . HOH E 3 . ? 21.388 12.788 28.021 1.00 25.22 ? 41 HOH A O     1 
HETATM 263 O  O     . HOH E 3 . ? 12.127 16.109 34.855 1.00 16.73 ? 44 HOH A O     1 
HETATM 264 O  O     . HOH E 3 . ? 3.398  15.330 36.502 1.00 19.23 ? 46 HOH A O     1 
HETATM 265 O  O     . HOH E 3 . ? 16.972 8.907  19.522 1.00 20.45 ? 48 HOH A O     1 
HETATM 266 O  O     . HOH E 3 . ? 7.933  16.572 33.849 1.00 23.55 ? 49 HOH A O     1 
HETATM 267 O  O     . HOH E 3 . ? 11.838 8.191  21.895 1.00 20.01 ? 51 HOH A O     1 
HETATM 268 O  O     . HOH E 3 . ? 16.548 7.500  38.140 1.00 20.96 ? 52 HOH A O     1 
HETATM 269 O  O     . HOH E 3 . ? 14.618 8.700  20.448 1.00 22.10 ? 53 HOH A O     1 
HETATM 270 O  O     . HOH E 3 . ? 6.615  11.363 29.588 1.00 27.99 ? 54 HOH A O     1 
HETATM 271 O  O     . HOH E 3 . ? 14.071 10.401 22.167 1.00 14.01 ? 55 HOH A O     1 
HETATM 272 O  O     . HOH E 3 . ? 11.731 14.614 25.537 1.00 28.94 ? 58 HOH A O     1 
HETATM 273 O  O     . HOH E 3 . ? 9.261  9.013  21.129 1.00 22.28 ? 63 HOH A O     1 
HETATM 274 O  O     . HOH E 3 . ? 22.703 20.240 27.451 1.00 27.96 ? 69 HOH A O     1 
HETATM 275 O  O     . HOH E 3 . ? 19.809 19.807 28.408 1.00 26.83 ? 71 HOH A O     1 
HETATM 276 O  O     . HOH E 3 . ? 23.369 17.734 28.622 1.00 24.44 ? 72 HOH A O     1 
HETATM 277 O  O     . HOH E 3 . ? 21.919 19.950 30.269 1.00 25.97 ? 73 HOH A O     1 
HETATM 278 O  O     . HOH E 3 . ? 20.906 17.920 26.690 1.00 25.49 ? 74 HOH A O     1 
HETATM 279 O  O     . HOH F 3 . ? 22.984 19.235 38.501 1.00 22.59 ? 15 HOH B O     1 
HETATM 280 O  O     . HOH F 3 . ? 16.949 22.471 25.911 1.00 23.48 ? 22 HOH B O     1 
HETATM 281 O  O     . HOH F 3 . ? 11.786 14.910 31.658 1.00 29.15 ? 23 HOH B O     1 
HETATM 282 O  O     . HOH F 3 . ? 9.899  15.464 27.593 1.00 36.42 ? 25 HOH B O     1 
HETATM 283 O  O     . HOH F 3 . ? 13.060 18.593 35.060 1.00 17.52 ? 28 HOH B O     1 
HETATM 284 O  O     . HOH F 3 . ? 21.355 18.937 36.707 1.00 26.36 ? 30 HOH B O     1 
HETATM 285 O  O     . HOH F 3 . ? 23.255 17.141 32.468 1.00 10.77 ? 31 HOH B O     1 
HETATM 286 O  O     . HOH F 3 . ? 8.078  15.640 31.418 1.00 23.20 ? 32 HOH B O     1 
HETATM 287 O  O     . HOH F 3 . ? 4.924  15.190 29.152 1.00 25.16 ? 35 HOH B O     1 
HETATM 288 O  O     . HOH F 3 . ? 9.493  13.588 19.415 1.00 24.12 ? 42 HOH B O     1 
HETATM 289 O  O     . HOH F 3 . ? 15.858 23.195 22.888 1.00 5.39  ? 43 HOH B O     1 
HETATM 290 O  O     . HOH F 3 . ? 13.729 24.261 37.695 1.00 39.38 ? 45 HOH B O     1 
HETATM 291 O  O     . HOH F 3 . ? 12.718 13.598 22.447 1.00 27.25 ? 47 HOH B O     1 
HETATM 292 O  O     . HOH F 3 . ? 19.313 9.071  37.397 1.00 19.55 ? 50 HOH B O     1 
HETATM 293 O  O     . HOH F 3 . ? 8.764  13.738 26.107 1.00 31.14 ? 56 HOH B O     1 
HETATM 294 O  O     . HOH F 3 . ? 5.471  15.683 25.412 1.00 20.02 ? 57 HOH B O     1 
HETATM 295 O  O     . HOH F 3 . ? 22.441 19.947 41.248 1.00 29.08 ? 59 HOH B O     1 
HETATM 296 O  O     . HOH F 3 . ? 11.752 12.377 19.299 1.00 26.19 ? 60 HOH B O     1 
HETATM 297 O  O     . HOH F 3 . ? 19.556 21.271 24.869 1.00 17.92 ? 61 HOH B O     1 
HETATM 298 O  O     . HOH F 3 . ? 23.020 17.314 37.259 1.00 23.67 ? 62 HOH B O     1 
HETATM 299 O  O     . HOH F 3 . ? 11.013 20.249 34.263 1.00 15.58 ? 64 HOH B O     1 
HETATM 300 O  O     . HOH F 3 . ? 11.414 24.306 33.590 1.00 11.99 ? 65 HOH B O     1 
HETATM 301 O  O     . HOH F 3 . ? 9.983  22.236 32.215 1.00 13.03 ? 66 HOH B O     1 
HETATM 302 O  O     . HOH F 3 . ? 12.257 22.863 35.709 1.00 13.31 ? 67 HOH B O     1 
HETATM 303 O  O     . HOH F 3 . ? 9.507  22.873 35.122 1.00 15.91 ? 68 HOH B O     1 
HETATM 304 O  O     . HOH F 3 . ? 20.605 17.196 29.628 1.00 25.14 ? 70 HOH B O     1 
#