data_3FTK # _entry.id 3FTK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FTK pdb_00003ftk 10.2210/pdb3ftk/pdb RCSB RCSB051024 ? ? WWPDB D_1000051024 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_entity_src_syn 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_entity_src_syn.details' 2 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 3 3 'Structure model' '_pdbx_entity_src_syn.organism_common_name' 4 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 3FTK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-01-13 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3FOD . unspecified PDB 3FPO . unspecified PDB 3FQP . unspecified PDB 3FR1 . unspecified PDB 3FTH . unspecified PDB 3FTK . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wiltzius, J.J.W.' 1 'Sawaya, M.R.' 2 'Eisenberg, D.' 3 # _citation.id primary _citation.title 'Molecular mechanisms for protein-encoded inheritance' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 16 _citation.page_first 973 _citation.page_last 978 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19684598 _citation.pdbx_database_id_DOI 10.1038/nsmb.1643 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wiltzius, J.J.' 1 ? primary 'Landau, M.' 2 ? primary 'Nelson, R.' 3 ? primary 'Sawaya, M.R.' 4 ? primary 'Apostol, M.I.' 5 ? primary 'Goldschmidt, L.' 6 ? primary 'Soriaga, A.B.' 7 ? primary 'Cascio, D.' 8 ? primary 'Rajashankar, K.' 9 ? primary 'Eisenberg, D.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'NVGSNTY heptapeptide segment from Islet Amyloid Polypeptide' 753.759 1 ? ? ? ? 2 water nat water 18.015 5 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code NVGSNTY _entity_poly.pdbx_seq_one_letter_code_can NVGSNTY _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 VAL n 1 3 GLY n 1 4 SER n 1 5 ASN n 1 6 THR n 1 7 TYR n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 TYR 7 7 7 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 8 1 HOH HOH A . B 2 HOH 2 9 2 HOH HOH A . B 2 HOH 3 10 3 HOH HOH A . B 2 HOH 4 11 4 HOH HOH A . B 2 HOH 5 12 5 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 # _cell.length_a 20.630 _cell.length_b 4.700 _cell.length_c 21.009 _cell.angle_alpha 90.000 _cell.angle_beta 92.280 _cell.angle_gamma 90.000 _cell.entry_id 3FTK _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3FTK _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3FTK _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews ? _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '0.1M HEPES pH 7.5, 25% PEG 3350, vapor diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-10-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E # _reflns.entry_id 3FTK _reflns.d_resolution_high 1.500 _reflns.d_resolution_low 90.000 _reflns.number_obs 742 _reflns.pdbx_Rmerge_I_obs 0.189 _reflns.pdbx_chi_squared 1.033 _reflns.pdbx_redundancy 5.200 _reflns.percent_possible_obs 95.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.number_all 742 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 12.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.62 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.392 _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.191 _reflns_shell.pdbx_redundancy 2.80 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 134 _reflns_shell.percent_possible_all 86.50 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3FTK _refine.ls_d_res_high 1.500 _refine.ls_d_res_low 20.980 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 94.500 _refine.ls_number_reflns_obs 739 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.149 _refine.ls_R_factor_R_work 0.148 _refine.ls_wR_factor_R_work 0.151 _refine.ls_R_factor_R_free 0.158 _refine.ls_wR_factor_R_free 0.158 _refine.ls_percent_reflns_R_free 10.400 _refine.ls_number_reflns_R_free 77 _refine.B_iso_mean 4.184 _refine.aniso_B[1][1] -0.210 _refine.aniso_B[2][2] 0.280 _refine.aniso_B[3][3] -0.080 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -0.140 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.969 _refine.overall_SU_R_Cruickshank_DPI 0.086 _refine.overall_SU_R_free 0.074 _refine.pdbx_overall_ESU_R 0.086 _refine.pdbx_overall_ESU_R_Free 0.074 _refine.overall_SU_ML 0.043 _refine.overall_SU_B 1.176 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.overall_FOM_work_R_set 0.919 _refine.B_iso_max 10.79 _refine.B_iso_min 2.55 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 53 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 58 _refine_hist.d_res_high 1.500 _refine_hist.d_res_low 20.980 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 53 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 28 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 72 1.124 1.919 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 69 0.687 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6 6.407 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 3 52.825 26.667 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 6 7.731 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 8 0.052 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 62 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 10 0.000 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 34 0.433 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 14 0.101 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 54 0.645 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 19 0.618 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 18 1.011 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.5 _refine_ls_shell.d_res_low 1.672 _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.percent_reflns_obs 84.950 _refine_ls_shell.number_reflns_R_work 155 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.199 _refine_ls_shell.R_factor_R_free 0.277 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 20 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 175 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FTK _struct.title 'NVGSNTY segment from Islet Amyloid Polypeptide (IAPP or Amylin), hydrated crystal form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FTK _struct_keywords.text 'amyloid-like protofibril, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3FTK _struct_ref.pdbx_db_accession 3FTK _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code NVGSNTY _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FTK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 7 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3FTK _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 7 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 7 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? trimeric 3 3 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3 A,B 2 4,5,6 A,B 3 1 A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4.7000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -4.7000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 2_555 -x,y+1/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2.3500000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 5 'crystal symmetry operation' 2_565 -x,y+3/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 7.0500000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 6 'crystal symmetry operation' 2_545 -x,y-1/2,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -2.3500000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;THE AUTHORS STATE THAT THE BIOLOGICAL UNIT IS A INDEFINITELY LONG PAIR OF SHEETS (A PROTOFIBRIL). ONE SHEET FORMED BY CHAIN A AND CRYSTALLOGRAPHIC TRANSLATIONS ALONG THE "B" CELL DIMENSION (E.G. X,Y,Z AND X,Y+1,Z). THE SECOND SHEET IS CONSTRUCTED FROM -X, Y+1/2,-Z AND CRYSTALLOGRAPHIC TRANSLATIONS ALONG THE "B" CELL DIMENSION (E.G. -X, Y+3/2,-Z). ; # _pdbx_phasing_MR.entry_id 3FTK _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation ? _pdbx_phasing_MR.d_res_low_rotation ? _pdbx_phasing_MR.d_res_high_translation ? _pdbx_phasing_MR.d_res_low_translation ? _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASN N N N N 1 ASN CA C N S 2 ASN C C N N 3 ASN O O N N 4 ASN CB C N N 5 ASN CG C N N 6 ASN OD1 O N N 7 ASN ND2 N N N 8 ASN OXT O N N 9 ASN H H N N 10 ASN H2 H N N 11 ASN HA H N N 12 ASN HB2 H N N 13 ASN HB3 H N N 14 ASN HD21 H N N 15 ASN HD22 H N N 16 ASN HXT H N N 17 GLY N N N N 18 GLY CA C N N 19 GLY C C N N 20 GLY O O N N 21 GLY OXT O N N 22 GLY H H N N 23 GLY H2 H N N 24 GLY HA2 H N N 25 GLY HA3 H N N 26 GLY HXT H N N 27 HOH O O N N 28 HOH H1 H N N 29 HOH H2 H N N 30 SER N N N N 31 SER CA C N S 32 SER C C N N 33 SER O O N N 34 SER CB C N N 35 SER OG O N N 36 SER OXT O N N 37 SER H H N N 38 SER H2 H N N 39 SER HA H N N 40 SER HB2 H N N 41 SER HB3 H N N 42 SER HG H N N 43 SER HXT H N N 44 THR N N N N 45 THR CA C N S 46 THR C C N N 47 THR O O N N 48 THR CB C N R 49 THR OG1 O N N 50 THR CG2 C N N 51 THR OXT O N N 52 THR H H N N 53 THR H2 H N N 54 THR HA H N N 55 THR HB H N N 56 THR HG1 H N N 57 THR HG21 H N N 58 THR HG22 H N N 59 THR HG23 H N N 60 THR HXT H N N 61 TYR N N N N 62 TYR CA C N S 63 TYR C C N N 64 TYR O O N N 65 TYR CB C N N 66 TYR CG C Y N 67 TYR CD1 C Y N 68 TYR CD2 C Y N 69 TYR CE1 C Y N 70 TYR CE2 C Y N 71 TYR CZ C Y N 72 TYR OH O N N 73 TYR OXT O N N 74 TYR H H N N 75 TYR H2 H N N 76 TYR HA H N N 77 TYR HB2 H N N 78 TYR HB3 H N N 79 TYR HD1 H N N 80 TYR HD2 H N N 81 TYR HE1 H N N 82 TYR HE2 H N N 83 TYR HH H N N 84 TYR HXT H N N 85 VAL N N N N 86 VAL CA C N S 87 VAL C C N N 88 VAL O O N N 89 VAL CB C N N 90 VAL CG1 C N N 91 VAL CG2 C N N 92 VAL OXT O N N 93 VAL H H N N 94 VAL H2 H N N 95 VAL HA H N N 96 VAL HB H N N 97 VAL HG11 H N N 98 VAL HG12 H N N 99 VAL HG13 H N N 100 VAL HG21 H N N 101 VAL HG22 H N N 102 VAL HG23 H N N 103 VAL HXT H N N 104 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASN N CA sing N N 1 ASN N H sing N N 2 ASN N H2 sing N N 3 ASN CA C sing N N 4 ASN CA CB sing N N 5 ASN CA HA sing N N 6 ASN C O doub N N 7 ASN C OXT sing N N 8 ASN CB CG sing N N 9 ASN CB HB2 sing N N 10 ASN CB HB3 sing N N 11 ASN CG OD1 doub N N 12 ASN CG ND2 sing N N 13 ASN ND2 HD21 sing N N 14 ASN ND2 HD22 sing N N 15 ASN OXT HXT sing N N 16 GLY N CA sing N N 17 GLY N H sing N N 18 GLY N H2 sing N N 19 GLY CA C sing N N 20 GLY CA HA2 sing N N 21 GLY CA HA3 sing N N 22 GLY C O doub N N 23 GLY C OXT sing N N 24 GLY OXT HXT sing N N 25 HOH O H1 sing N N 26 HOH O H2 sing N N 27 SER N CA sing N N 28 SER N H sing N N 29 SER N H2 sing N N 30 SER CA C sing N N 31 SER CA CB sing N N 32 SER CA HA sing N N 33 SER C O doub N N 34 SER C OXT sing N N 35 SER CB OG sing N N 36 SER CB HB2 sing N N 37 SER CB HB3 sing N N 38 SER OG HG sing N N 39 SER OXT HXT sing N N 40 THR N CA sing N N 41 THR N H sing N N 42 THR N H2 sing N N 43 THR CA C sing N N 44 THR CA CB sing N N 45 THR CA HA sing N N 46 THR C O doub N N 47 THR C OXT sing N N 48 THR CB OG1 sing N N 49 THR CB CG2 sing N N 50 THR CB HB sing N N 51 THR OG1 HG1 sing N N 52 THR CG2 HG21 sing N N 53 THR CG2 HG22 sing N N 54 THR CG2 HG23 sing N N 55 THR OXT HXT sing N N 56 TYR N CA sing N N 57 TYR N H sing N N 58 TYR N H2 sing N N 59 TYR CA C sing N N 60 TYR CA CB sing N N 61 TYR CA HA sing N N 62 TYR C O doub N N 63 TYR C OXT sing N N 64 TYR CB CG sing N N 65 TYR CB HB2 sing N N 66 TYR CB HB3 sing N N 67 TYR CG CD1 doub Y N 68 TYR CG CD2 sing Y N 69 TYR CD1 CE1 sing Y N 70 TYR CD1 HD1 sing N N 71 TYR CD2 CE2 doub Y N 72 TYR CD2 HD2 sing N N 73 TYR CE1 CZ doub Y N 74 TYR CE1 HE1 sing N N 75 TYR CE2 CZ sing Y N 76 TYR CE2 HE2 sing N N 77 TYR CZ OH sing N N 78 TYR OH HH sing N N 79 TYR OXT HXT sing N N 80 VAL N CA sing N N 81 VAL N H sing N N 82 VAL N H2 sing N N 83 VAL CA C sing N N 84 VAL CA CB sing N N 85 VAL CA HA sing N N 86 VAL C O doub N N 87 VAL C OXT sing N N 88 VAL CB CG1 sing N N 89 VAL CB CG2 sing N N 90 VAL CB HB sing N N 91 VAL CG1 HG11 sing N N 92 VAL CG1 HG12 sing N N 93 VAL CG1 HG13 sing N N 94 VAL CG2 HG21 sing N N 95 VAL CG2 HG22 sing N N 96 VAL CG2 HG23 sing N N 97 VAL OXT HXT sing N N 98 # _atom_sites.entry_id 3FTK _atom_sites.fract_transf_matrix[1][1] 0.048473 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001927 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.212766 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.047636 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 N N . ASN A 1 1 ? -8.053 2.244 10.035 1.00 2.55 ? 1 ASN A N 1 ATOM 2 C CA . ASN A 1 1 ? -7.146 1.404 9.189 1.00 3.47 ? 1 ASN A CA 1 ATOM 3 C C . ASN A 1 1 ? -5.816 2.087 8.950 1.00 3.17 ? 1 ASN A C 1 ATOM 4 O O . ASN A 1 1 ? -5.758 3.321 8.852 1.00 3.94 ? 1 ASN A O 1 ATOM 5 C CB . ASN A 1 1 ? -7.763 1.152 7.820 1.00 3.56 ? 1 ASN A CB 1 ATOM 6 C CG . ASN A 1 1 ? -9.089 0.451 7.893 1.00 4.84 ? 1 ASN A CG 1 ATOM 7 O OD1 . ASN A 1 1 ? -9.228 -0.582 8.550 1.00 3.89 ? 1 ASN A OD1 1 ATOM 8 N ND2 . ASN A 1 1 ? -10.079 1.000 7.196 1.00 5.72 ? 1 ASN A ND2 1 ATOM 9 N N . VAL A 1 2 ? -4.764 1.287 8.797 1.00 3.10 ? 2 VAL A N 1 ATOM 10 C CA . VAL A 1 2 ? -3.455 1.811 8.428 1.00 2.97 ? 2 VAL A CA 1 ATOM 11 C C . VAL A 1 2 ? -2.983 1.191 7.112 1.00 3.07 ? 2 VAL A C 1 ATOM 12 O O . VAL A 1 2 ? -2.795 -0.022 7.021 1.00 3.02 ? 2 VAL A O 1 ATOM 13 C CB . VAL A 1 2 ? -2.422 1.556 9.537 1.00 3.17 ? 2 VAL A CB 1 ATOM 14 C CG1 . VAL A 1 2 ? -1.068 2.099 9.133 1.00 3.57 ? 2 VAL A CG1 1 ATOM 15 C CG2 . VAL A 1 2 ? -2.891 2.193 10.846 1.00 2.92 ? 2 VAL A CG2 1 ATOM 16 N N . GLY A 1 3 ? -2.826 2.026 6.087 1.00 3.19 ? 3 GLY A N 1 ATOM 17 C CA . GLY A 1 3 ? -2.174 1.597 4.853 1.00 3.43 ? 3 GLY A CA 1 ATOM 18 C C . GLY A 1 3 ? -2.913 0.559 4.022 1.00 3.57 ? 3 GLY A C 1 ATOM 19 O O . GLY A 1 3 ? -2.283 -0.300 3.409 1.00 4.06 ? 3 GLY A O 1 ATOM 20 N N . SER A 1 4 ? -4.242 0.605 4.010 1.00 3.39 ? 4 SER A N 1 ATOM 21 C CA . SER A 1 4 ? -5.004 -0.260 3.112 1.00 3.68 ? 4 SER A CA 1 ATOM 22 C C . SER A 1 4 ? -5.207 0.519 1.821 1.00 4.09 ? 4 SER A C 1 ATOM 23 O O . SER A 1 4 ? -6.098 1.372 1.732 1.00 5.28 ? 4 SER A O 1 ATOM 24 C CB . SER A 1 4 ? -6.344 -0.675 3.720 1.00 3.75 ? 4 SER A CB 1 ATOM 25 O OG . SER A 1 4 ? -6.162 -1.618 4.772 1.00 3.41 ? 4 SER A OG 1 ATOM 26 N N . ASN A 1 5 ? -4.357 0.245 0.834 1.00 3.94 ? 5 ASN A N 1 ATOM 27 C CA . ASN A 1 5 ? -4.364 0.983 -0.422 1.00 3.71 ? 5 ASN A CA 1 ATOM 28 C C . ASN A 1 5 ? -5.130 0.236 -1.501 1.00 3.72 ? 5 ASN A C 1 ATOM 29 O O . ASN A 1 5 ? -5.216 -0.988 -1.466 1.00 3.39 ? 5 ASN A O 1 ATOM 30 C CB . ASN A 1 5 ? -2.934 1.234 -0.903 1.00 3.86 ? 5 ASN A CB 1 ATOM 31 C CG . ASN A 1 5 ? -2.073 1.921 0.141 1.00 4.32 ? 5 ASN A CG 1 ATOM 32 O OD1 . ASN A 1 5 ? -2.183 3.133 0.348 1.00 4.93 ? 5 ASN A OD1 1 ATOM 33 N ND2 . ASN A 1 5 ? -1.198 1.156 0.790 1.00 5.06 ? 5 ASN A ND2 1 ATOM 34 N N . THR A 1 6 ? -5.665 0.966 -2.474 1.00 3.56 ? 6 THR A N 1 ATOM 35 C CA . THR A 1 6 ? -6.325 0.330 -3.613 1.00 4.02 ? 6 THR A CA 1 ATOM 36 C C . THR A 1 6 ? -5.649 0.745 -4.907 1.00 4.23 ? 6 THR A C 1 ATOM 37 O O . THR A 1 6 ? -5.265 1.911 -5.077 1.00 4.48 ? 6 THR A O 1 ATOM 38 C CB . THR A 1 6 ? -7.836 0.647 -3.670 1.00 3.80 ? 6 THR A CB 1 ATOM 39 O OG1 . THR A 1 6 ? -8.045 2.009 -4.079 1.00 3.85 ? 6 THR A OG1 1 ATOM 40 C CG2 . THR A 1 6 ? -8.475 0.415 -2.313 1.00 4.23 ? 6 THR A CG2 1 ATOM 41 N N . TYR A 1 7 ? -5.476 -0.225 -5.798 1.00 4.81 ? 7 TYR A N 1 ATOM 42 C CA . TYR A 1 7 ? -4.867 0.008 -7.094 1.00 4.98 ? 7 TYR A CA 1 ATOM 43 C C . TYR A 1 7 ? -5.813 -0.526 -8.165 1.00 5.68 ? 7 TYR A C 1 ATOM 44 O O . TYR A 1 7 ? -7.019 -0.262 -8.088 1.00 6.23 ? 7 TYR A O 1 ATOM 45 C CB . TYR A 1 7 ? -3.489 -0.658 -7.153 1.00 4.76 ? 7 TYR A CB 1 ATOM 46 C CG . TYR A 1 7 ? -2.565 -0.266 -6.006 1.00 3.61 ? 7 TYR A CG 1 ATOM 47 C CD1 . TYR A 1 7 ? -2.629 -0.917 -4.774 1.00 3.04 ? 7 TYR A CD1 1 ATOM 48 C CD2 . TYR A 1 7 ? -1.640 0.763 -6.152 1.00 3.20 ? 7 TYR A CD2 1 ATOM 49 C CE1 . TYR A 1 7 ? -1.775 -0.564 -3.720 1.00 2.80 ? 7 TYR A CE1 1 ATOM 50 C CE2 . TYR A 1 7 ? -0.794 1.129 -5.105 1.00 3.51 ? 7 TYR A CE2 1 ATOM 51 C CZ . TYR A 1 7 ? -0.875 0.472 -3.894 1.00 3.02 ? 7 TYR A CZ 1 ATOM 52 O OH . TYR A 1 7 ? -0.043 0.839 -2.857 1.00 2.79 ? 7 TYR A OH 1 ATOM 53 O OXT . TYR A 1 7 ? -5.434 -1.204 -9.116 1.00 6.63 ? 7 TYR A OXT 1 HETATM 54 O O . HOH B 2 . ? -7.936 2.059 -6.888 1.00 6.96 ? 8 HOH A O 1 HETATM 55 O O . HOH B 2 . ? -8.886 2.742 5.054 1.00 5.93 ? 9 HOH A O 1 HETATM 56 O O . HOH B 2 . ? -10.796 2.690 -3.833 1.00 3.97 ? 10 HOH A O 1 HETATM 57 O O . HOH B 2 . ? -9.930 0.739 11.239 1.00 8.08 ? 11 HOH A O 1 HETATM 58 O O . HOH B 2 . ? -8.793 0.531 1.261 1.00 10.79 ? 12 HOH A O 1 #