Structure based on 1gag

Ideal structure
Name: thiophosphoric acid o-((adenosyl-phospho)phospho)-s-acetamidyl-diester
Formula: C12 H19 N6 O13 P3 S
Weight: 580.298
SMILES: "NC(=O)CS[P](O)(=O)O[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23"
Spacial conformation based on PDB 1gag.
Also present on 1rqq, 2g1t, 2g2f, 2gs6
RESIDUE   112     54
CONECT      NS     3 C2S  HNS1 HNS2
CONECT      C2S    3 NS   O2S  C1S 
CONECT      O2S    1 C2S 
CONECT      C1S    4 C2S  S1G  H1S1 H1S2
CONECT      PG     4 S1G  O2G  O3G  O3B 
CONECT      S1G    2 C1S  PG  
CONECT      O2G    2 PG   HOG2
CONECT      O3G    1 PG  
CONECT      PB     4 O1B  O2B  O3B  O3A 
CONECT      O1B    1 PB  
CONECT      O2B    2 PB   HOB2
CONECT      O3B    2 PG   PB  
CONECT      PA     4 O1A  O2A  O3A  O5' 
CONECT      O1A    1 PA  
CONECT      O2A    2 PA   HOA2
CONECT      O3A    2 PB   PA  
CONECT      O5'    2 PA   C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      C2'    4 C3'  O2'  C1'  H2' 
CONECT      O2'    2 C2'  HO2'
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   N6   N1  
CONECT      N6     3 C6   HN61 HN62
CONECT      N1     2 C6   C2  
CONECT      C2     3 N1   N3   H2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      HNS1   1 NS  
CONECT      HNS2   1 NS  
CONECT      H1S1   1 C1S 
CONECT      H1S2   1 C1S 
CONECT      HOG2   1 O2G 
CONECT      HOB2   1 O2B 
CONECT      HOA2   1 O2A 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      H2'    1 C2' 
CONECT      HO2'   1 O2' 
CONECT      H1'    1 C1' 
CONECT      H8     1 C8  
CONECT      HN61   1 N6  
CONECT      HN62   1 N6  
CONECT      H2     1 C2  
HET    112             54
FORMUL      112    C12 H19 N6 O13 P3 S1

uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science