Structure based on 4nqd | Ideal structure |
|
Name: 1-deoxy-1-({2,6-dioxo-5-[(e)-(2-oxopropylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-d-ribitol |
Formula: C12 H18 N4 O7 |
Weight: 330.294 |
SMILES: "CC(=O)C=NC1=C(NC[CH](O)[CH](O)[CH](O)CO)NC(=O)NC1=O" |
Spacial conformation based on PDB
4nqd. Also present in other
18 PDB entries. |
RESIDUE 2LJ 42
CONECT C4 3 N3 C4A O4
CONECT C6 3 C7 N5 H1
CONECT C7 4 C6 C8 H2 H3
CONECT C8 4 C7 H4 H5 H6
CONECT N1 3 C2 C8A H8
CONECT N3 3 C4 C2 H7
CONECT N5 2 C6 C4A
CONECT C4A 3 C4 N5 C8A
CONECT O4 1 C4
CONECT C2 3 N1 N3 O2
CONECT O2 1 C2
CONECT C8A 3 N1 C4A N8
CONECT N8 3 C8A C1' H9
CONECT C1' 4 N8 C2' H10 H11
CONECT C2' 4 C1' O2' C3' H12
CONECT O2' 2 C2' H13
CONECT C3' 4 C2' O3' C4' H14
CONECT O3' 2 C3' H15
CONECT C4' 4 C3' O4' C5' H16
CONECT O4' 2 C4' H17
CONECT C5' 4 C4' O5' H18 H19
CONECT O5' 2 C5' H20
CONECT H1 1 C6
CONECT H2 1 C7
CONECT H3 1 C7
CONECT H4 1 C8
CONECT H5 1 C8
CONECT H6 1 C8
CONECT H7 1 N3
CONECT H9 1 N8
CONECT H10 1 C1'
CONECT H11 1 C1'
CONECT H12 1 C2'
CONECT H13 1 O2'
CONECT H14 1 C3'
CONECT H15 1 O3'
CONECT H16 1 C4'
CONECT H17 1 O4'
CONECT H18 1 C5'
CONECT H19 1 C5'
CONECT H20 1 O5'
CONECT H8 1 N1
END
HET 2LJ 42
HETSYN 2LJ 5-(2-oxopropylideneamino)-6-D-ribitylaminouracil
HETNAM 2LJ 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-
HETNAM 2 2LJ tetrahydropyrimidin-4-yl}amino)-D-ribitol
FORMUL 2LJ C12 H20 N4 O6