MONOMER pageuses Jmol, developed by the Jmol Development Team (color reference)
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: 1-(3-hydroxypropyl)-2-{(1e,3e,5e)-5-[1-(3-hydroxypropyl)-3,3-dimethyl-1,3-dihydro-2h-indol-2-ylidene]penta-1,3-dien-1-yl}-3,3-dimethyl-3h-indolium | ||
| Formula: C31 H39 N2 O2 | ||
| Weight: 471.654 | ||
| SMILES: "CC1(C)C(=CC=CC=CC2=[N+](CCCO)c3ccccc3C2(C)C)N(CCCO)c4ccccc14" | ||
| Spacial conformation based on PDB
4jrp. Also present on 3bep, 4k8x, 5ns3 |
RESIDUE 5CY 74
CONECT N1 3 C10 C11 C14
CONECT C1 4 C2 H1 H2 H3
CONECT O1 2 C13 H4
CONECT C10 3 N1 C20 C9
CONECT C11 4 N1 C12 H5 H6
CONECT C12 4 C11 C13 H7 H8
CONECT C13 4 O1 C12 H9 H10
CONECT C14 3 N1 C15 C19
CONECT C15 3 C14 C16 H11
CONECT C16 3 C15 C17 H12
CONECT C17 3 C16 C18 H13
CONECT C18 3 C17 C19 H14
CONECT C19 3 C14 C18 C20
CONECT O2 2 C25 H15
CONECT C2 4 C1 C3 C31 C4
CONECT N2 3 C23 C26 C4
CONECT C20 4 C10 C19 C21 C22
CONECT C21 4 C20 H16 H17 H18
CONECT C22 4 C20 H19 H20 H21
CONECT C23 4 N2 C24 H22 H23
CONECT C24 4 C23 C25 H24 H25
CONECT C25 4 O2 C24 H26 H27
CONECT C26 3 N2 C27 C31
CONECT C27 3 C26 C28 H28
CONECT C28 3 C27 C29 H29
CONECT C29 3 C28 C30 H30
CONECT C3 4 C2 H31 H32 H33
CONECT C30 3 C29 C31 H34
CONECT C31 3 C2 C26 C30
CONECT C4 3 C2 N2 C5
CONECT C5 3 C4 C6 H36
CONECT C6 3 C5 C7 H37
CONECT C7 3 C6 C8 H38
CONECT C8 3 C7 C9 H39
CONECT C9 3 C10 C8 H40
CONECT H1 1 C1
CONECT H2 1 C1
CONECT H3 1 C1
CONECT H4 1 O1
CONECT H5 1 C11
CONECT H6 1 C11
CONECT H7 1 C12
CONECT H8 1 C12
CONECT H9 1 C13
CONECT H10 1 C13
CONECT H11 1 C15
CONECT H12 1 C16
CONECT H13 1 C17
CONECT H14 1 C18
CONECT H15 1 O2
CONECT H16 1 C21
CONECT H17 1 C21
CONECT H18 1 C21
CONECT H19 1 C22
CONECT H20 1 C22
CONECT H21 1 C22
CONECT H22 1 C23
CONECT H23 1 C23
CONECT H24 1 C24
CONECT H25 1 C24
CONECT H26 1 C25
CONECT H27 1 C25
CONECT H28 1 C27
CONECT H29 1 C28
CONECT H30 1 C29
CONECT H31 1 C3
CONECT H32 1 C3
CONECT H33 1 C3
CONECT H34 1 C30
CONECT H36 1 C5
CONECT H37 1 C6
CONECT H38 1 C7
CONECT H39 1 C8
CONECT H40 1 C9
END
HET 5CY 74
HETSYN 5CY N,N'-(dipropyl)-tetramethylindodicarbocyanine
HETNAM 5CY 1-(3-hydroxypropyl)-2-{(1E,3E,5E)-5-[1-(3-hydroxypropyl
HETNAM 2 5CY )-3,3-dimethyl-1,3-dihydro-2H-indol-2-ylidene]penta-1,3
HETNAM 3 5CY -dien-1-y l}-3,3-dimethyl-3H-indolium
FORMUL 5CY C31 H39 N2 O2 1+
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This OCA
MONOMER page uses Jmol, developed by the Jmol Development Team (color reference)
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