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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: 2'-deoxy-5-(hydroxymethyl)cytidine 5'-(dihydrogen phosphate) | ||
| Formula: C10 H16 N3 O8 P | ||
| Weight: 337.223 | ||
| SMILES: "NC1=NC(=O)N(C=C1CO)[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2" | ||
| Spacial conformation based on PDB
4glc. Also present in other 31 PDB entries. |
RESIDUE 5HC 38 CONECT P 4 OP1 OP2 O5' OP3 CONECT OP1 1 P CONECT OP2 2 P HOP2 CONECT O5' 2 P C5' CONECT C5' 4 O5' C4' H5' H5'' CONECT C4' 4 C5' O4' C3' H4 CONECT O4' 2 C4' C1' CONECT C3' 4 C4' O3' C2' H3' CONECT O3' 2 C3' HO3' CONECT C2' 4 C3' C1' H2' H2'' CONECT C1' 4 O4' C2' N1 H1' CONECT N1 3 C1' C2 C6 CONECT C2 3 N1 O2 N3 CONECT O2 1 C2 CONECT N3 2 C2 C4 CONECT C4 3 N3 N4 C5 CONECT N4 3 C4 HN41 HN42 CONECT C5 3 C4 C5M C6 CONECT C5M 4 C5 O5 H5M2 H5M1 CONECT O5 2 C5M HO5 CONECT C6 3 N1 C5 H6 CONECT OP3 2 P HOP3 CONECT HOP2 1 OP2 CONECT H5' 1 C5' CONECT H5'' 1 C5' CONECT H4 1 C4' CONECT H3' 1 C3' CONECT HO3' 1 O3' CONECT H2' 1 C2' CONECT H2'' 1 C2' CONECT H1' 1 C1' CONECT HN41 1 N4 CONECT HN42 1 N4 CONECT H5M2 1 C5M CONECT H5M1 1 C5M CONECT HO5 1 O5 CONECT H6 1 C6 CONECT HOP3 1 OP3 END HET 5HC 38 HETNAM 5HC 2'-deoxy-5-(hydroxymethyl)cytidine 5'-(dihydrogen phosp HETNAM 2 5HC hate) FORMUL 5HC C10 H16 N3 O8 P1
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This OCA
MONOMER page uses Jmol, developed by the Jmol Development Team (color reference)
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