Structure based on 5e9c

Ideal structure
Name: 2-deoxy-6-o-sulfo-2-(sulfoamino)-beta-d-glucopyranose
Formula: C6 H13 N O11 S2
Weight: 339.298
SMILES: "O[CH]1O[CH](CO[S](O)(=O)=O)[CH](O)[CH](O)[CH]1N[S](O)(=O)=O"
Spacial conformation based on PDB 5e9c
RESIDUE   5KV     33
CONECT      O4     2 C4   HO4 
CONECT      C3     4 C4   C2   O3   H3  
CONECT      C4     4 O4   C3   C5   H4  
CONECT      C5     4 C4   O5   C6   H5  
CONECT      C2     4 C3   C1   N2   H2  
CONECT      C1     4 C2   O5   O1   H1  
CONECT      O5     2 C5   C1  
CONECT      O1     2 C1   HO1 
CONECT      N2     3 C2   S34  HN21
CONECT      O3     2 C3   HO3 
CONECT      C6     4 C5   O6   H61  H62 
CONECT      O6     2 C6   S33 
CONECT      S33    4 O6   O38  O39  O40 
CONECT      S34    4 N2   O35  O36  O37 
CONECT      O35    1 S34 
CONECT      O36    2 S34  H12 
CONECT      O37    1 S34 
CONECT      O38    1 S33 
CONECT      O39    2 S33  H13 
CONECT      O40    1 S33 
CONECT      HO4    1 O4  
CONECT      H3     1 C3  
CONECT      H4     1 C4  
CONECT      H5     1 C5  
CONECT      H2     1 C2  
CONECT      H1     1 C1  
CONECT      HO1    1 O1  
CONECT      HN21   1 N2  
CONECT      HO3    1 O3  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      H12    1 O36 
CONECT      H13    1 O39 
END   
HET    5KV             33
HETSYN     5KV 6-O-sulfo-N-sulfo-beta-D-glucosamine; 2-deoxy-6-O-sulfo
HETSYN   2 5KV -2-(sulfoamino)-beta-D-glucose; 2-deoxy-6-O-sulfo-2-(su
HETSYN   3 5KV lfoamino)-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-g
HETSYN   4 5KV lucose
HETNAM     5KV 2-deoxy-6-O-sulfo-2-(sulfoamino)-beta-D-glucopyranose
FORMUL      5KV    C6 H13 N1 O11 S2

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science