Structure based on 4cis

Ideal structure
Name: 1r,2s,4r)-4-[2-azanyl-6,8-bis(oxidanylidene)-1,7-dihydropurin-9-yl]-2-oxidanyl-cyclopentyl]methyl dihydrogen phosphate
Formula: C11 H16 N5 O7 P
Weight: 361.248
SMILES: "NC1=NC2=C(NC(=O)N2[CH]3C[CH](O)[CH](CO[P](O)(O)=O)C3)C(=O)N1"
Spacial conformation based on PDB 4cis
RESIDUE   68Z     40
CONECT      P      4 O1P  O2P  O5'  O3P 
CONECT      O1P    2 P    H1P 
CONECT      O2P    1 P   
CONECT      O5'    2 P    C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  C3'  C6'  H4' 
CONECT      C3'    4 C4'  C2'  O3'  H3'A
CONECT      C2'    4 C3'  C1'  H2'1 H2'2
CONECT      C1'    4 C2'  C6'  N9   H1' 
CONECT      C6'    4 C4'  C1'  H6'1 H6'2
CONECT      N9     3 C1'  C4   C8  
CONECT      C4     3 N9   N3   C5  
CONECT      N3     2 C4   C2  
CONECT      C2     3 N3   N2   N1  
CONECT      N2     3 C2   H21N H22N
CONECT      N1     3 C2   C6   H1  
CONECT      C6     3 N1   O6   C5  
CONECT      O6     1 C6  
CONECT      C5     3 C4   C6   N7  
CONECT      N7     3 C5   C8   H7  
CONECT      C8     3 N9   N7   O8  
CONECT      O8     1 C8  
CONECT      O3'    2 C3'  H3' 
CONECT      O3P    2 P    H3P 
CONECT      H1P    1 O1P 
CONECT      H3P    1 O3P 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'A   1 C3' 
CONECT      H6'1   1 C6' 
CONECT      H6'2   1 C6' 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H3'    1 O3' 
CONECT      H1'    1 C1' 
CONECT      H21N   1 N2  
CONECT      H22N   1 N2  
CONECT      H1     1 N1  
CONECT      H7     1 N7  
END   
HET    68Z             40
HETNAM     68Z 1R,2S,4R)-4-[2-azanyl-6,8-bis(oxidanylidene)-1,7-dihydr
HETNAM   2 68Z opurin-9-yl]-2-oxidanyl-cyclopentyl]methyl dihydrogen p
HETNAM   3 68Z hosphate
FORMUL      68Z    C11 H16 N5 O7 P1

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science