MONOMER pageuses Jmol, developed by the Jmol Development Team (color reference)
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: 2'-deoxy-5'-o-[(s)-{difluoro[(s)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine | ||
| Formula: C10 H16 F2 N3 O12 P3 | ||
| Weight: 501.165 | ||
| SMILES: "NC1=NC(=O)N(C=C1)[CH]2C[CH](O)[CH](CO[P](O)(=O)C(F)(F)[P](O)(=O)O[P](O)(O)=O)O2" | ||
| Spacial conformation based on PDB
3rjh. Also present in other 7 PDB entries. |
RESIDUE 6CF 46
CONECT N1 3 C2 C6 C1'
CONECT P1 4 O1A O2A C3A O5'
CONECT C2 3 N1 O2 N3
CONECT O2 1 C2
CONECT P2 4 O1B O2B C3A O3B
CONECT N3 2 C2 C4
CONECT P3 4 O1G O2G O3B O3G
CONECT C4 3 N3 N4 C5
CONECT N4 3 C4 HN4 HN4A
CONECT C5 3 C4 C6 H5
CONECT C6 3 N1 C5 H6
CONECT C1' 4 N1 C2' O4' H1'
CONECT F1A 1 C3A
CONECT O1A 2 P1 HO1A
CONECT O1B 1 P2
CONECT O1G 2 P3 HO1G
CONECT C2' 4 C1' C3' H2' H2'A
CONECT F2A 1 C3A
CONECT O2A 1 P1
CONECT O2B 2 P2 HO2B
CONECT O2G 2 P3 HO2G
CONECT C3' 4 C2' O3' C4' H3'
CONECT O3' 2 C3' HO3'
CONECT C3A 4 P1 P2 F1A F2A
CONECT O3B 2 P2 P3
CONECT O3G 1 P3
CONECT C4' 4 C3' O4' C5' H4'
CONECT O4' 2 C1' C4'
CONECT C5' 4 C4' O5' H5' H5'A
CONECT O5' 2 P1 C5'
CONECT HN4 1 N4
CONECT HN4A 1 N4
CONECT H5 1 C5
CONECT H6 1 C6
CONECT H1' 1 C1'
CONECT HO1A 1 O1A
CONECT HO1G 1 O1G
CONECT H2' 1 C2'
CONECT H2'A 1 C2'
CONECT HO2B 1 O2B
CONECT HO2G 1 O2G
CONECT H3' 1 C3'
CONECT HO3' 1 O3'
CONECT H4' 1 C4'
CONECT H5' 1 C5'
CONECT H5'A 1 C5'
END
HET 6CF 46
HETNAM 6CF 2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)p
HETNAM 2 6CF hosphoryl]methyl}(hydroxy)phosphoryl]cytidine
FORMUL 6CF C10 H16 F2 N3 O12 P3
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This OCA
MONOMER page uses Jmol, developed by the Jmol Development Team (color reference)
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