Structure based on 1hpu

Ideal structure
Name: phosphomethylphosphonic acid adenosyl ester
Formula: C11 H17 N5 O9 P2
Weight: 425.228
SMILES: "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)C[P](O)(O)=O)[CH](O)[CH]3O"
Spacial conformation based on PDB 1hpu.
Also present in other 6 PDB entries.
RESIDUE   A12     44
CONECT      PB     4 O1B  O2B  O3B  C3A 
CONECT      O1B    1 PB  
CONECT      O2B    2 PB   HOB2
CONECT      O3B    2 PB   HXT 
CONECT      PA     4 O1A  O2A  C3A  O5' 
CONECT      O1A    1 PA  
CONECT      O2A    2 PA   HOA2
CONECT      C3A    4 PB   PA   H3A1 H3A2
CONECT      O5'    2 PA   C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      C2'    4 C3'  O2'  C1'  H2' 
CONECT      O2'    2 C2'  HO2'
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   N6   N1  
CONECT      N6     3 C6   HN61 HN62
CONECT      N1     2 C6   C2  
CONECT      C2     3 N1   N3   H2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      HOB2   1 O2B 
CONECT      HXT    1 O3B 
CONECT      HOA2   1 O2A 
CONECT      H3A1   1 C3A 
CONECT      H3A2   1 C3A 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      H2'    1 C2' 
CONECT      HO2'   1 O2' 
CONECT      H1'    1 C1' 
CONECT      H8     1 C8  
CONECT      HN61   1 N6  
CONECT      HN62   1 N6  
CONECT      H2     1 C2  
END   
HET    A12             44
HETSYN     A12 ALPHA,BETA-METHYLENEADENOSINE-5'-DIPHOSPHATE
HETNAM     A12 PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
FORMUL      A12    C11 H17 N5 O9 P2

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science