Structure based on 1d4r

Ideal structure
Name: adenosine-5'-phosphate-2',3'-cyclic phosphate
Formula: C10 H13 N5 O9 P2
Weight: 409.186
SMILES: "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH]4O[P](O)(=O)O[CH]34"
Spacial conformation based on PDB 1d4r.
Also present in other 35 PDB entries.
RESIDUE   A23     39
CONECT      PC     4 O1C  O2C  O3'  O2' 
CONECT      O1C    1 PC  
CONECT      O2C    2 PC   HOC2
CONECT      P      4 OP1  OP2  OP3  O5' 
CONECT      OP1    1 P   
CONECT      OP2    2 P    HOP2
CONECT      OP3    2 P    HOP3
CONECT      O5'    2 P    C5' 
CONECT      C5'    4 O5'  C4'  H5'  H5''
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 PC   C3' 
CONECT      C2'    4 C3'  O2'  C1'  H2' 
CONECT      O2'    2 PC   C2' 
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   N6   N1  
CONECT      N6     3 C6   HN61 HN62
CONECT      N1     2 C6   C2  
CONECT      C2     3 N1   N3   H2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      HOC2   1 O2C 
CONECT      HOP2   1 OP2 
CONECT      HOP3   1 OP3 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      H2'    1 C2' 
CONECT      H1'    1 C1' 
CONECT      H8     1 C8  
CONECT      HN61   1 N6  
CONECT      HN62   1 N6  
CONECT      H2     1 C2  
END   
HET    A23             39
HETNAM     A23 ADENOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE
FORMUL      A23    C10 H13 N5 O9 P2

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science