Structure based on 3ok2 | Ideal structure |
|
Name: 2-(4-amino-2-oxopyrimidin-1(2h)-yl)-1,5-anhydro-2-deoxy-6-o-phosphono-d-altritol |
Formula: C10 H16 N3 O8 P |
Weight: 337.223 |
SMILES: "NC1=NC(=O)N(C=C1)[CH]2CO[CH](CO[P](O)(O)=O)[CH](O)[CH]2O" |
Spacial conformation based on PDB
3ok2. Also present on 3ok4 |
RESIDUE A6C 38
CONECT P 4 O5' OP1 OP2 OP3
CONECT N1 3 C2 C6 C1'
CONECT C2 3 N1 O2 N3
CONECT O2 1 C2
CONECT N3 2 C2 C4
CONECT C4 3 N3 N4 C5
CONECT N4 3 C4 HN4 HN4A
CONECT C5 3 C4 C6 H5
CONECT C6 3 N1 C5 H6
CONECT C1' 4 N1 C2' C6' H1'
CONECT C2' 4 C1' O2' C3' H2'
CONECT O2' 2 C2' HO2'
CONECT C3' 4 C2' O3' C4' H3'
CONECT O3' 2 C3' HO3'
CONECT C4' 4 C3' O4' C5' H4'
CONECT O4' 2 C4' C6'
CONECT C5' 4 C4' O5' H5' H5'A
CONECT O5' 2 P C5'
CONECT C6' 4 C1' O4' H6' H6'A
CONECT OP1 1 P
CONECT OP2 2 P HOP2
CONECT OP3 2 P HOP3
CONECT HN4 1 N4
CONECT HN4A 1 N4
CONECT H5 1 C5
CONECT H6 1 C6
CONECT H1' 1 C1'
CONECT H2' 1 C2'
CONECT HO2' 1 O2'
CONECT H3' 1 C3'
CONECT HO3' 1 O3'
CONECT H4' 1 C4'
CONECT H5' 1 C5'
CONECT H5'A 1 C5'
CONECT H6' 1 C6'
CONECT H6'A 1 C6'
CONECT HOP2 1 OP2
CONECT HOP3 1 OP3
END
HET A6C 38
HETSYN A6C ((2R,3S,4S,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-3,4-
HETSYN 2 A6C dihydroxytetrahydro-2H-pyran-2-yl)methyl dihydrogen pho
HETSYN 3 A6C sphate
HETNAM A6C 2-(4-amino-2-oxopyrimidin-1(2H)-yl)-1,5-anhydro-2-deoxy
HETNAM 2 A6C -6-O-phosphono-D-altritol
FORMUL A6C C10 H16 N3 O8 P1