Structure based on 4a1i

Ideal structure
Name: 8-n-octylamino-adenosine diphosphate hydroxypyrrolidinediol
Formula: C23 H42 N7 O12 P2
Weight: 670.567
SMILES: "CCCCCCCCNc1nc2c(N)ncnc2n1[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]4[NH2+]C[CH](O)[CH]4O)[CH](O)[CH]3O"
Spacial conformation based on PDB 4a1i.
Also present on 4b1i
RESIDUE   A8P     86
CONECT      C1     4 C2   H1   H1A  H1B 
CONECT      C2     4 C1   C3   H2   H2A 
CONECT      C3     4 C2   C4   H3   H3A 
CONECT      C4     4 C3   C5   H4   H4A 
CONECT      C5     4 C4   C6   H5   H5A 
CONECT      C6     4 C5   C7   H6   H6A 
CONECT      C7     4 C6   C8   H7   H7A 
CONECT      C8     4 C7   N9   H81  H82 
CONECT      N9     3 C8   C10  H9  
CONECT      C10    3 N9   N11  N18 
CONECT      N11    2 C10  C12 
CONECT      C12    3 N11  C13  C17 
CONECT      C13    3 C12  N14  N44 
CONECT      N14    2 C13  C15 
CONECT      C15    3 N14  N16  H15 
CONECT      N16    2 C15  C17 
CONECT      C17    3 C12  N16  N18 
CONECT      N18    3 C10  C17  C19 
CONECT      C19    4 N18  C20  O23  H19 
CONECT      C20    4 C19  C21  O43  H20 
CONECT      C21    4 C20  C22  O42  H21 
CONECT      C22    4 C21  O23  C24  H22 
CONECT      O23    2 C19  C22 
CONECT      C24    4 C22  O25  H24  H24A
CONECT      O25    2 C24  P26 
CONECT      P26    4 O25  O27  O28  O29 
CONECT      O27    2 P26  HO27
CONECT      O28    1 P26 
CONECT      O29    2 P26  P30 
CONECT      P30    4 O29  O31  O32  O33 
CONECT      O31    2 P30  HO31
CONECT      O32    1 P30 
CONECT      O33    2 P30  C34 
CONECT      C34    4 O33  C35  H34  H34A
CONECT      C35    4 C34  C36  N39  H35 
CONECT      C36    4 C35  C37  O41  H36 
CONECT      C37    4 C36  C38  O40  H37 
CONECT      C38    4 C37  N39  H38  H38A
CONECT      N39    4 C35  C38  H39A H39B
CONECT      O40    2 C37  HO40
CONECT      O41    2 C36  HO41
CONECT      O42    2 C21  HO42
CONECT      O43    2 C20  HO43
CONECT      N44    3 C13  HN44 HN4A
CONECT      H1     1 C1  
CONECT      H1A    1 C1  
CONECT      H2     1 C2  
CONECT      H3     1 C3  
CONECT      H3A    1 C3  
CONECT      H4     1 C4  
CONECT      H4A    1 C4  
CONECT      H5     1 C5  
CONECT      H5A    1 C5  
CONECT      H6     1 C6  
CONECT      H6A    1 C6  
CONECT      H7     1 C7  
CONECT      H7A    1 C7  
CONECT      H81    1 C8  
CONECT      H15    1 C15 
CONECT      H19    1 C19 
CONECT      H20    1 C20 
CONECT      H21    1 C21 
CONECT      H22    1 C22 
CONECT      H24    1 C24 
CONECT      H24A   1 C24 
CONECT      HO27   1 O27 
CONECT      HO31   1 O31 
CONECT      H34    1 C34 
CONECT      H34A   1 C34 
CONECT      H35    1 C35 
CONECT      H36    1 C36 
CONECT      H37    1 C37 
CONECT      H38    1 C38 
CONECT      H38A   1 C38 
CONECT      H39A   1 N39 
CONECT      HO40   1 O40 
CONECT      HO41   1 O41 
CONECT      HO42   1 O42 
CONECT      HO43   1 O43 
CONECT      HN44   1 N44 
CONECT      HN4A   1 N44 
CONECT      H9     1 N9  
CONECT      H82    1 C8  
CONECT      H1B    1 C1  
CONECT      H2A    1 C2  
CONECT      H39B   1 N39 
END   
HET    A8P             86
HETNAM     A8P 8-n-octylamino-adenosine diphosphate hydroxypyrrolidine
HETNAM   2 A8P diol
FORMUL      A8P    C23 H42 N7 O12 P2 1+

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science