Structure based on 2f4t

Ideal structure
Name: (2r)-4-amino-n-{(1r,2s,3r,4r,5s)-5-amino-2-{2-[(2-aminoethyl)amino]ethoxy}-4-[(2,6-diamino-2,6-dideoxy-alpha-d-glucopyranosyl)oxy]-3-hydroxycyclohexyl}-2-hydroxybutanamide
Formula: C20 H43 N7 O8
Weight: 509.598
SMILES: "NCCNCCO[CH]1[CH](O)[CH](O[CH]2O[CH](CN)[CH](O)[CH](O)[CH]2N)[CH](N)C[CH]1NC(=O)[CH](O)CCN"
Spacial conformation based on PDB 2f4t.
Also present on 2f4v
RESIDUE   AB9     78
CONECT      C11    4 C21  O11  O51  H11 
CONECT      C12    4 C22  N12  C62  H12 
CONECT      C21    4 C11  C31  N21  H21 
CONECT      C22    4 C12  C32  H221 H222
CONECT      C23    3 C24  N12  O36 
CONECT      C24    4 C23  C25  O28  H24 
CONECT      C25    4 C24  C26  H251 H252
CONECT      C26    4 C25  N27  H261 H262
CONECT      C29    4 C30  O62  H291 H292
CONECT      C30    4 C29  N31  H301 H302
CONECT      C31    4 C21  O31  C41  H3  
CONECT      C32    4 C22  N32  C42  H32 
CONECT      C33    4 C35  N34  H331 H332
CONECT      C35    4 C33  N31  H351 H352
CONECT      O11    2 C11  C42 
CONECT      N21    3 C21  H211 H212
CONECT      O31    2 C31  H4  
CONECT      C41    4 C31  O41  C51  H41 
CONECT      O41    2 C41  H2  
CONECT      C51    4 C41  O51  C61  H51 
CONECT      O51    2 C11  C51 
CONECT      C61    4 C51  N61  H611 H612
CONECT      N61    3 C61  H11A H12A
CONECT      N12    3 C12  C23  H5  
CONECT      N32    3 C32  H321 H322
CONECT      C42    4 C32  O11  C52  H42 
CONECT      C52    4 C42  O52  C62  H52 
CONECT      O52    2 C52  H1  
CONECT      C62    4 C12  C52  O62  H62 
CONECT      O62    2 C29  C62 
CONECT      N31    3 C30  C35  H31 
CONECT      N34    3 C33  H341 H342
CONECT      O36    1 C23 
CONECT      N27    3 C26  H271 H272
CONECT      O28    2 C24  H28 
CONECT      H11    1 C11 
CONECT      H12    1 C12 
CONECT      H21    1 C21 
CONECT      H221   1 C22 
CONECT      H222   1 C22 
CONECT      H24    1 C24 
CONECT      H251   1 C25 
CONECT      H252   1 C25 
CONECT      H261   1 C26 
CONECT      H262   1 C26 
CONECT      H291   1 C29 
CONECT      H292   1 C29 
CONECT      H301   1 C30 
CONECT      H302   1 C30 
CONECT      H3     1 C31 
CONECT      H32    1 C32 
CONECT      H331   1 C33 
CONECT      H332   1 C33 
CONECT      H351   1 C35 
CONECT      H352   1 C35 
CONECT      H211   1 N21 
CONECT      H212   1 N21 
CONECT      H4     1 O31 
CONECT      H41    1 C41 
CONECT      H2     1 O41 
CONECT      H51    1 C51 
CONECT      H611   1 C61 
CONECT      H612   1 C61 
CONECT      H11A   1 N61 
CONECT      H12A   1 N61 
CONECT      H5     1 N12 
CONECT      H321   1 N32 
CONECT      H322   1 N32 
CONECT      H42    1 C42 
CONECT      H52    1 C52 
CONECT      H1     1 O52 
CONECT      H62    1 C62 
CONECT      H31    1 N31 
CONECT      H341   1 N34 
CONECT      H342   1 N34 
CONECT      H271   1 N27 
CONECT      H272   1 N27 
CONECT      H28    1 O28 
END   
HET    AB9             78
HETNAM     AB9 (2R)-4-AMINO-N-{(1R,2S,3R,4R,5S)-5-AMINO-2-{2-[(2-AMINO
HETNAM   2 AB9 ETHYL)AMINO]ETHOXY}-4-[(2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D
HETNAM   3 AB9 -GLUCOPYRANOSYL)OXY]-3-HYDROXYCYCLOHEXYL}-2-HYDROXYBUTA
HETNAM   4 AB9 NAMIDE
FORMUL      AB9    C20 H43 N7 O8

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science