Structure based on 1l2b

Ideal structure
Name: 2'-deoxy-adenosine-3'-5'-diphosphate
Formula: C10 H15 N5 O9 P2
Weight: 411.202
SMILES: "Nc1ncnc2n(cnc12)[CH]3C[CH](O[P](O)(O)=O)[CH](CO[P](O)(O)=O)O3"
Spacial conformation based on PDB 1l2b.
Also present on 6lwr
RESIDUE   AD2     41
CONECT      P1     4 OP1  OP2  O5'  OP3 
CONECT      OP1    1 P1  
CONECT      OP2    2 P1   HOP2
CONECT      O5'    2 P1   C5' 
CONECT      P2     4 O5P  O4P  O6P  O3' 
CONECT      O5P    2 P2   HOP5
CONECT      O4P    1 P2  
CONECT      O6P    2 P2   HOP6
CONECT      N9     3 C4   C8   C1' 
CONECT      C4     3 N9   N3   C5  
CONECT      N3     2 C4   C2  
CONECT      C2     3 N3   N1   H2  
CONECT      N1     2 C2   C6  
CONECT      C6     3 N1   N6   C5  
CONECT      N6     3 C6   H61  H62 
CONECT      C5     3 C4   C6   N7  
CONECT      N7     2 C5   C8  
CONECT      C8     3 N9   N7   H8  
CONECT      C2'    4 C1'  C3'  H2'1 H2'2
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C1'    4 N9   C2'  O4'  H1' 
CONECT      C3'    4 C2'  C4'  O3'  H3' 
CONECT      O3'    2 P2   C3' 
CONECT      OP3    2 P1   HOP3
CONECT      HOP2   1 OP2 
CONECT      HOP5   1 O5P 
CONECT      HOP6   1 O6P 
CONECT      H2     1 C2  
CONECT      H61    1 N6  
CONECT      H62    1 N6  
CONECT      H8     1 C8  
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H1'    1 C1' 
CONECT      H3'    1 C3' 
CONECT      HOP3   1 OP3 
HET    AD2             41
FORMUL      AD2    C10 H15 N5 O9 P2

uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science