Structure based on 4amx

Ideal structure
Name: 2-oxo-1,2,dideoxy-5f-d-glucopyranose
Formula: C6 H9 F O5
Weight: 180.131
SMILES: "OC[C]1(F)OCC(=O)[CH](O)[CH]1O"
Spacial conformation based on PDB 4amx
RESIDUE   AFR     21
CONECT      F1     1 C5  
CONECT      C5     4 F1   C4   C6   O5  
CONECT      C4     4 C5   O4   C3   H4  
CONECT      O4     2 C4   HO4 
CONECT      C6     4 C5   O6   H61  H62 
CONECT      O6     2 C6   H6  
CONECT      O5     2 C5   C1  
CONECT      C1     4 O5   C2   H11  H12 
CONECT      C2     3 C1   O2   C3  
CONECT      O2     1 C2  
CONECT      C3     4 C4   C2   O3   H3  
CONECT      O3     2 C3   HO3 
CONECT      H4     1 C4  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      HO4    1 O4  
CONECT      H3     1 C3  
CONECT      H6     1 O6  
CONECT      H11    1 C1  
CONECT      H12    1 C1  
CONECT      HO3    1 O3  
END   
HET    AFR             21
HETSYN     AFR 2-OXO-1,2,DIDEOXY-5F-D-GLUCOPYRANOSE; alpha-D-threo-hex
HETSYN   2 AFR o-2,5-diulo-5,1-syl fluoride; D-threo-hexo-2,5-diulo-5,
HETSYN   3 AFR 1-syl fluoride; threo-hexo-2,5-diulo-5,1-syl fluoride
HETNAM     AFR alpha-D-threo-hexo-2,5-diulo-5,1-pyranosyl fluoride
FORMUL      AFR    C6 H9 F1 O5

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science