Structure based on 363d

Ideal structure
Name: 3'-amino-2'-deoxy-cytidine-5'-monophosphate
Formula: C9 H15 N4 O6 P
Weight: 306.212
SMILES: "N[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=CC(=NC2=O)N"
Spacial conformation based on PDB 363d.
Also present on 6ur2, 6ur4, 6us5
RESIDUE   C42     35
CONECT      N1     3 C2   C6   C1' 
CONECT      C2     3 N1   N3   O2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   C5   N4  
CONECT      C5     3 C4   C6   H5  
CONECT      C6     3 N1   C5   H6  
CONECT      O2     1 C2  
CONECT      N4     3 C4   H4N1 H4N2
CONECT      C1'    4 N1   C2'  O4'  H1' 
CONECT      C2'    4 C1'  C3'  H2'1 H2'2
CONECT      C3'    4 C2'  C4'  N    H3' 
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      O4'    2 C1'  C4' 
CONECT      C5'    4 C4'  O5'  H5'1 H5'2
CONECT      O5'    2 C5'  P   
CONECT      P      4 O5'  O1P  O2P  O3P 
CONECT      O1P    2 P    H1P 
CONECT      O2P    1 P   
CONECT      O3P    2 P    H3P 
CONECT      N      3 C3'  HN1  HN2 
CONECT      H5     1 C5  
CONECT      H6     1 C6  
CONECT      H4N1   1 N4  
CONECT      H4N2   1 N4  
CONECT      H1'    1 C1' 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H3'    1 C3' 
CONECT      H4'    1 C4' 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H1P    1 O1P 
CONECT      H3P    1 O3P 
CONECT      HN1    1 N   
CONECT      HN2    1 N   
END   
HET    C42             35
HETNAM     C42 3'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
FORMUL      C42    C9 H15 N4 O6 P1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science