Structure based on 1n35

Ideal structure
Name: 3'-deoxy-cytidine-5'-triphosphate
Formula: C9 H16 N3 O13 P3
Weight: 467.157
SMILES: "NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)C[CH]2O"
Spacial conformation based on PDB 1n35.
Also present in other 5 PDB entries.
RESIDUE   CH1     44
CONECT      N1     3 C2   C6   C1' 
CONECT      C2     3 N1   N3   O2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   C5   N4  
CONECT      C5     3 C4   C6   H5  
CONECT      C6     3 N1   C5   H6  
CONECT      O2     1 C2  
CONECT      N4     3 C4   HN41 HN42
CONECT      C1'    4 N1   C2'  O4'  H1' 
CONECT      C2'    4 C1'  O2'  C3'  H2' 
CONECT      O2'    2 C2'  HO2'
CONECT      C3'    4 C2'  C4'  H3'2 H3' 
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      O4'    2 C1'  C4' 
CONECT      C5'    4 C4'  O5'  H5'1 H5'2
CONECT      O5'    2 C5'  PA  
CONECT      PA     4 O5'  O1A  O2A  O3A 
CONECT      O1A    1 PA  
CONECT      O2A    2 PA   HOA2
CONECT      O3A    2 PA   PB  
CONECT      PB     4 O3A  O1B  O2B  O3B 
CONECT      O1B    1 PB  
CONECT      O2B    2 PB   HOB2
CONECT      O3B    2 PB   PG  
CONECT      PG     4 O3B  O1G  O2G  O3G 
CONECT      O1G    1 PG  
CONECT      O2G    2 PG   HOG2
CONECT      O3G    2 PG   HOG3
CONECT      H5     1 C5  
CONECT      H6     1 C6  
CONECT      HN41   1 N4  
CONECT      HN42   1 N4  
CONECT      H1'    1 C1' 
CONECT      H2'    1 C2' 
CONECT      HO2'   1 O2' 
CONECT      H3'2   1 C3' 
CONECT      H3'    1 C3' 
CONECT      H4'    1 C4' 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      HOA2   1 O2A 
CONECT      HOB2   1 O2B 
CONECT      HOG2   1 O2G 
CONECT      HOG3   1 O3G 
END   
HET    CH1             44
HETNAM     CH1 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE
FORMUL      CH1    C9 H16 N3 O13 P3

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uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science