Structure based on 3cx5

Ideal structure
Name: (2r,5s,11r,14r)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl undecanoate
Formula: C36 H68 O17 P2
Weight: 834.862
SMILES: "CCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OC[CH](O)CO[P](O)(=O)OC[CH](COC(=O)CC)OC(=O)CCC)OC(=O)CCCCCCCC"
Spacial conformation based on PDB 3cx5.
Also present on 6giq, 6ymx, 6ymy
RESIDUE   CN3    123
CONECT      P      4 O11  O12  O13  O14 
CONECT      O11    2 P    C1  
CONECT      O12    2 P    HO12
CONECT      O13    2 P    CC  
CONECT      O14    1 P   
CONECT      C1     4 O11  C2   H1   H1A 
CONECT      C2     4 C1   C3   O21  H2  
CONECT      C3     4 C2   O31  H3   H3A 
CONECT      O31    2 C3   C31 
CONECT      O32    1 C31 
CONECT      C31    3 O31  O32  C32 
CONECT      C32    4 C31  C33  H32  H67 
CONECT      C33    4 C32  H33  H33A H68 
CONECT      O21    2 C2   C21 
CONECT      O22    1 C21 
CONECT      C21    3 O21  O22  C22 
CONECT      C22    4 C21  C23  H22  H22A
CONECT      C23    4 C22  C24  H23  H23A
CONECT      C24    4 C23  H24  H24A H24B
CONECT      P'     4 O1'  O2'  O3'  O4' 
CONECT      O1'    2 P'   C1' 
CONECT      O2'    1 P'  
CONECT      O3'    2 P'   CA  
CONECT      O4'    2 P'   HO4'
CONECT      C1'    4 O1'  C2'  H1'  H1'A
CONECT      C2'    4 C1'  C3'  O51  H2' 
CONECT      C3'    4 C2'  O41  H3'  H3'A
CONECT      O41    2 C3'  C41 
CONECT      O42    1 C41 
CONECT      C41    3 O41  O42  C42 
CONECT      C42    4 C41  C43  H42  H42A
CONECT      C43    4 C42  C44  H43  H43A
CONECT      C44    4 C43  C45  H44  H44A
CONECT      C45    4 C44  C46  H45  H45A
CONECT      C46    4 C45  C47  H46  H46A
CONECT      C47    4 C46  C48  H47  H47A
CONECT      C48    4 C47  C49  H48  H48A
CONECT      C49    4 C48  C4A  H49  H49A
CONECT      C4A    4 C49  C4B  H4A  H4AA
CONECT      C4B    4 C4A  H4B  H4BA H4BB
CONECT      O51    2 C2'  C51 
CONECT      O52    1 C51 
CONECT      C51    3 O51  O52  C52 
CONECT      C52    4 C51  C53  H52  H52A
CONECT      C53    4 C52  C54  H53  H53A
CONECT      C54    4 C53  C55  H54  H54A
CONECT      C55    4 C54  C56  H55  H55A
CONECT      C56    4 C55  C57  H56  H56A
CONECT      C57    4 C56  C58  H57  H57A
CONECT      C58    4 C57  C59  H58  H58A
CONECT      C59    4 C58  H59  H59A H59B
CONECT      CA     4 O3'  CB   HA   HAA 
CONECT      CB     4 CA   OA   CC   HB  
CONECT      OA     2 CB   HOA 
CONECT      CC     4 O13  CB   HC   HCA 
CONECT      HO12   1 O12 
CONECT      H1     1 C1  
CONECT      H1A    1 C1  
CONECT      H2     1 C2  
CONECT      H3     1 C3  
CONECT      H3A    1 C3  
CONECT      H32    1 C32 
CONECT      H33    1 C33 
CONECT      H33A   1 C33 
CONECT      H22    1 C22 
CONECT      H22A   1 C22 
CONECT      H23    1 C23 
CONECT      H23A   1 C23 
CONECT      H24    1 C24 
CONECT      H24A   1 C24 
CONECT      H24B   1 C24 
CONECT      HO4'   1 O4' 
CONECT      H1'    1 C1' 
CONECT      H1'A   1 C1' 
CONECT      H2'    1 C2' 
CONECT      H3'    1 C3' 
CONECT      H3'A   1 C3' 
CONECT      H42    1 C42 
CONECT      H42A   1 C42 
CONECT      H43    1 C43 
CONECT      H43A   1 C43 
CONECT      H44    1 C44 
CONECT      H44A   1 C44 
CONECT      H45    1 C45 
CONECT      H45A   1 C45 
CONECT      H46    1 C46 
CONECT      H46A   1 C46 
CONECT      H47    1 C47 
CONECT      H47A   1 C47 
CONECT      H48    1 C48 
CONECT      H48A   1 C48 
CONECT      H49    1 C49 
CONECT      H49A   1 C49 
CONECT      H4A    1 C4A 
CONECT      H4AA   1 C4A 
CONECT      H4B    1 C4B 
CONECT      H4BA   1 C4B 
CONECT      H4BB   1 C4B 
CONECT      H52    1 C52 
CONECT      H52A   1 C52 
CONECT      H53    1 C53 
CONECT      H53A   1 C53 
CONECT      H54    1 C54 
CONECT      H54A   1 C54 
CONECT      H55    1 C55 
CONECT      H55A   1 C55 
CONECT      H56    1 C56 
CONECT      H56A   1 C56 
CONECT      H57    1 C57 
CONECT      H57A   1 C57 
CONECT      H58    1 C58 
CONECT      H58A   1 C58 
CONECT      H59    1 C59 
CONECT      H59A   1 C59 
CONECT      H59B   1 C59 
CONECT      HA     1 CA  
CONECT      HAA    1 CA  
CONECT      HB     1 CB  
CONECT      HOA    1 OA  
CONECT      HC     1 CC  
CONECT      HCA    1 CC  
CONECT      H67    1 C32 
CONECT      H68    1 C33 
END   
HET    CN3            123
HETSYN     CN3 CARDIOLIPIN
HETNAM     CN3 (2R,5S,11R,14R)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-
HETNAM   2 CN3 dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-p
HETNAM   3 CN3 entaoxa-5,11-diphosphanonadec-1-yl undecanoate
FORMUL      CN3    C36 H68 O17 P2

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science