Structure based on 3cx5 | Ideal structure |
|
Name: (2r,5s,11r,14r)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl undecanoate |
Formula: C36 H68 O17 P2 |
Weight: 834.862 |
SMILES: "CCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OC[CH](O)CO[P](O)(=O)OC[CH](COC(=O)CC)OC(=O)CCC)OC(=O)CCCCCCCC" |
Spacial conformation based on PDB
3cx5. Also present on 6giq, 6ymx, 6ymy |
RESIDUE CN3 123
CONECT P 4 O11 O12 O13 O14
CONECT O11 2 P C1
CONECT O12 2 P HO12
CONECT O13 2 P CC
CONECT O14 1 P
CONECT C1 4 O11 C2 H1 H1A
CONECT C2 4 C1 C3 O21 H2
CONECT C3 4 C2 O31 H3 H3A
CONECT O31 2 C3 C31
CONECT O32 1 C31
CONECT C31 3 O31 O32 C32
CONECT C32 4 C31 C33 H32 H67
CONECT C33 4 C32 H33 H33A H68
CONECT O21 2 C2 C21
CONECT O22 1 C21
CONECT C21 3 O21 O22 C22
CONECT C22 4 C21 C23 H22 H22A
CONECT C23 4 C22 C24 H23 H23A
CONECT C24 4 C23 H24 H24A H24B
CONECT P' 4 O1' O2' O3' O4'
CONECT O1' 2 P' C1'
CONECT O2' 1 P'
CONECT O3' 2 P' CA
CONECT O4' 2 P' HO4'
CONECT C1' 4 O1' C2' H1' H1'A
CONECT C2' 4 C1' C3' O51 H2'
CONECT C3' 4 C2' O41 H3' H3'A
CONECT O41 2 C3' C41
CONECT O42 1 C41
CONECT C41 3 O41 O42 C42
CONECT C42 4 C41 C43 H42 H42A
CONECT C43 4 C42 C44 H43 H43A
CONECT C44 4 C43 C45 H44 H44A
CONECT C45 4 C44 C46 H45 H45A
CONECT C46 4 C45 C47 H46 H46A
CONECT C47 4 C46 C48 H47 H47A
CONECT C48 4 C47 C49 H48 H48A
CONECT C49 4 C48 C4A H49 H49A
CONECT C4A 4 C49 C4B H4A H4AA
CONECT C4B 4 C4A H4B H4BA H4BB
CONECT O51 2 C2' C51
CONECT O52 1 C51
CONECT C51 3 O51 O52 C52
CONECT C52 4 C51 C53 H52 H52A
CONECT C53 4 C52 C54 H53 H53A
CONECT C54 4 C53 C55 H54 H54A
CONECT C55 4 C54 C56 H55 H55A
CONECT C56 4 C55 C57 H56 H56A
CONECT C57 4 C56 C58 H57 H57A
CONECT C58 4 C57 C59 H58 H58A
CONECT C59 4 C58 H59 H59A H59B
CONECT CA 4 O3' CB HA HAA
CONECT CB 4 CA OA CC HB
CONECT OA 2 CB HOA
CONECT CC 4 O13 CB HC HCA
CONECT HO12 1 O12
CONECT H1 1 C1
CONECT H1A 1 C1
CONECT H2 1 C2
CONECT H3 1 C3
CONECT H3A 1 C3
CONECT H32 1 C32
CONECT H33 1 C33
CONECT H33A 1 C33
CONECT H22 1 C22
CONECT H22A 1 C22
CONECT H23 1 C23
CONECT H23A 1 C23
CONECT H24 1 C24
CONECT H24A 1 C24
CONECT H24B 1 C24
CONECT HO4' 1 O4'
CONECT H1' 1 C1'
CONECT H1'A 1 C1'
CONECT H2' 1 C2'
CONECT H3' 1 C3'
CONECT H3'A 1 C3'
CONECT H42 1 C42
CONECT H42A 1 C42
CONECT H43 1 C43
CONECT H43A 1 C43
CONECT H44 1 C44
CONECT H44A 1 C44
CONECT H45 1 C45
CONECT H45A 1 C45
CONECT H46 1 C46
CONECT H46A 1 C46
CONECT H47 1 C47
CONECT H47A 1 C47
CONECT H48 1 C48
CONECT H48A 1 C48
CONECT H49 1 C49
CONECT H49A 1 C49
CONECT H4A 1 C4A
CONECT H4AA 1 C4A
CONECT H4B 1 C4B
CONECT H4BA 1 C4B
CONECT H4BB 1 C4B
CONECT H52 1 C52
CONECT H52A 1 C52
CONECT H53 1 C53
CONECT H53A 1 C53
CONECT H54 1 C54
CONECT H54A 1 C54
CONECT H55 1 C55
CONECT H55A 1 C55
CONECT H56 1 C56
CONECT H56A 1 C56
CONECT H57 1 C57
CONECT H57A 1 C57
CONECT H58 1 C58
CONECT H58A 1 C58
CONECT H59 1 C59
CONECT H59A 1 C59
CONECT H59B 1 C59
CONECT HA 1 CA
CONECT HAA 1 CA
CONECT HB 1 CB
CONECT HOA 1 OA
CONECT HC 1 CC
CONECT HCA 1 CC
CONECT H67 1 C32
CONECT H68 1 C33
END
HET CN3 123
HETSYN CN3 CARDIOLIPIN
HETNAM CN3 (2R,5S,11R,14R)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-
HETNAM 2 CN3 dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-p
HETNAM 3 CN3 entaoxa-5,11-diphosphanonadec-1-yl undecanoate
FORMUL CN3 C36 H68 O17 P2