Structure based on 1z4q | Ideal structure |
|
Name: [(5r)-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2h)-yl)-2,5-dihydrofuran-2-yl]methyl dihydrogen phosphate |
Formula: C10 H13 N2 O7 P |
Weight: 304.193 |
SMILES: "CC1=CN([CH]2O[CH](CO[P](O)(O)=O)C=C2)C(=O)NC1=O" |
Spacial conformation based on PDB
1z4q. Also present on 6wpf |
RESIDUE D4M 33
CONECT OP2 2 P HOP2
CONECT P 4 OP2 OP1 OP3 O5'
CONECT OP1 1 P
CONECT OP3 2 P HOP3
CONECT O5' 2 P C5'
CONECT C5' 4 O5' C4' H5' H5''
CONECT C4' 4 C5' O4' C3' H4'
CONECT O4' 2 C4' C1'
CONECT C3' 3 C4' C2' H3'
CONECT C2' 3 C3' C1' H2'
CONECT C1' 4 O4' C2' N1 H1'
CONECT N1 3 C1' C6 C2
CONECT C6 3 N1 C5 H6
CONECT C5 3 C6 C5M C4
CONECT C5M 4 C5 H71 H72 H73
CONECT C4 3 C5 O4 N3
CONECT O4 1 C4
CONECT N3 3 C4 C2 H3
CONECT C2 3 N1 N3 O2
CONECT O2 1 C2
CONECT HOP2 1 OP2
CONECT HOP3 1 OP3
CONECT H5' 1 C5'
CONECT H5'' 1 C5'
CONECT H4' 1 C4'
CONECT H3' 1 C3'
CONECT H2' 1 C2'
CONECT H1' 1 C1'
CONECT H6 1 C6
CONECT H71 1 C5M
CONECT H72 1 C5M
CONECT H73 1 C5M
CONECT H3 1 N3
END
HET D4M 33
HETSYN D4M 2',3'-DIDEOXY-2',3-DIDEHYDROTHYMIDINE 5'-MONOPHOSPHATE;
HETSYN 2 D4M 2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-MONOPHOSPHATE
HETNAM D4M [(5R)-5-(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-
HETNAM 2 D4M YL)-2,5-DIHYDROFURAN-2-YL]METHYL DIHYDROGEN PHOSPHATE
FORMUL D4M C10 H13 N2 O7 P