Structure based on 1j07

Ideal structure
Name: 3,8-diamino-5,10'-(trimethylammonium)decyl-6-phenyl phenanthridinium
Formula: C32 H44 N4
Weight: 484.719
SMILES: "C[N+](C)(C)CCCCCCCCCC[n+]1c2cc(N)ccc2c3ccc(N)cc3c1c4ccccc4"
Spacial conformation based on PDB 1j07
RESIDUE   DCU     80
CONECT      C2     4 C3   N23  H21A H22 
CONECT      C3     4 C2   C4   H31A H32A
CONECT      C4     4 C3   C5   H41  H42 
CONECT      C5     4 C4   C6   H51  H52 
CONECT      C6     4 C5   C7   H61  H62 
CONECT      C7     4 C6   C8   H71  H72 
CONECT      C8     4 C7   C9   H81  H82 
CONECT      C9     4 C8   C10  H91  H92 
CONECT      C10    4 C9   C11  H101 H102
CONECT      C11    4 C10  N12  H111 H112
CONECT      N12    4 C11  C13  C14  C15 
CONECT      C13    4 N12  H131 H132 H133
CONECT      C14    4 N12  H141 H142 H143
CONECT      C15    4 N12  H151 H152 H153
CONECT      C16    3 C17  C21  H16 
CONECT      C17    3 C16  C18  C25 
CONECT      C18    3 C17  C19  C22 
CONECT      C19    3 C18  C20  H19 
CONECT      C20    3 C19  C21  N36 
CONECT      C21    3 C16  C20  H21 
CONECT      C22    3 C18  N23  C30 
CONECT      N23    3 C2   C22  C24 
CONECT      C24    3 N23  C25  C26 
CONECT      C25    3 C17  C24  C29 
CONECT      C26    3 C24  C27  H26 
CONECT      C27    3 C26  C28  N37 
CONECT      C28    3 C27  C29  H28 
CONECT      C29    3 C25  C28  H29 
CONECT      C30    3 C22  C31  C35 
CONECT      C31    3 C30  C32  H31 
CONECT      C32    3 C31  C33  H32 
CONECT      C33    3 C32  C34  H33 
CONECT      C34    3 C33  C35  H34 
CONECT      C35    3 C30  C34  H35 
CONECT      N36    3 C20  H361 H362
CONECT      N37    3 C27  H371 H372
CONECT      H21A   1 C2  
CONECT      H22    1 C2  
CONECT      H31A   1 C3  
CONECT      H32A   1 C3  
CONECT      H41    1 C4  
CONECT      H42    1 C4  
CONECT      H51    1 C5  
CONECT      H52    1 C5  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      H71    1 C7  
CONECT      H72    1 C7  
CONECT      H81    1 C8  
CONECT      H82    1 C8  
CONECT      H91    1 C9  
CONECT      H92    1 C9  
CONECT      H101   1 C10 
CONECT      H102   1 C10 
CONECT      H111   1 C11 
CONECT      H112   1 C11 
CONECT      H131   1 C13 
CONECT      H132   1 C13 
CONECT      H133   1 C13 
CONECT      H141   1 C14 
CONECT      H142   1 C14 
CONECT      H143   1 C14 
CONECT      H151   1 C15 
CONECT      H152   1 C15 
CONECT      H153   1 C15 
CONECT      H16    1 C16 
CONECT      H19    1 C19 
CONECT      H21    1 C21 
CONECT      H26    1 C26 
CONECT      H28    1 C28 
CONECT      H29    1 C29 
CONECT      H31    1 C31 
CONECT      H32    1 C32 
CONECT      H33    1 C33 
CONECT      H34    1 C34 
CONECT      H35    1 C35 
CONECT      H361   1 N36 
CONECT      H362   1 N36 
CONECT      H371   1 N37 
CONECT      H372   1 N37 
HET    DCU             80
FORMUL      DCU    C32 H44 N4 2+

uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science