Structure based on 3mr2

Ideal structure
Name: 2'-deoxy-5'-o-[(r)-hydroxy{[(r)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine
Formula: C10 H17 N6 O11 P3
Weight: 490.197
SMILES: "Nc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(=O)N[P](O)(=O)O[P](O)(O)=O)O3"
Spacial conformation based on PDB 3mr2.
Also present in other 12 PDB entries.
RESIDUE   DZ4     47
CONECT      N1     2 C2   C6  
CONECT      C2     3 N1   N3   H2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   C5   N9  
CONECT      C5     3 C4   C6   N7  
CONECT      C6     3 N1   C5   N6  
CONECT      N6     3 C6   HN6  HN6A
CONECT      N7     2 C5   C8  
CONECT      C8     3 N7   N9   H8  
CONECT      N9     3 C4   C8   C1' 
CONECT      PA     4 O1A  O2A  N3A  O5' 
CONECT      PB     4 O1B  O2B  N3A  O3B 
CONECT      PG     4 O1G  O2G  O3B  O3G 
CONECT      C1'    4 N9   C2'  O4'  H1' 
CONECT      O1A    1 PA  
CONECT      O1B    1 PB  
CONECT      O1G    1 PG  
CONECT      C2'    4 C1'  C3'  H2'  H2'A
CONECT      O2A    2 PA   HO2A
CONECT      O2B    2 PB   HO2B
CONECT      O2G    2 PG   HO2G
CONECT      C3'    4 C2'  O3'  C4'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      N3A    3 PA   PB   HN3A
CONECT      O3B    2 PB   PG  
CONECT      O3G    2 PG   HO3G
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      O4'    2 C1'  C4' 
CONECT      C5'    4 C4'  O5'  H5'  H5'A
CONECT      O5'    2 PA   C5' 
CONECT      H2     1 C2  
CONECT      HN6    1 N6  
CONECT      HN6A   1 N6  
CONECT      H8     1 C8  
CONECT      H1'    1 C1' 
CONECT      H2'    1 C2' 
CONECT      H2'A   1 C2' 
CONECT      HO2A   1 O2A 
CONECT      HO2B   1 O2B 
CONECT      HO2G   1 O2G 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      HN3A   1 N3A 
CONECT      HO3G   1 O3G 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H5'A   1 C5' 
END   
HET    DZ4             47
HETNAM     DZ4 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)ph
HETNAM   2 DZ4 osphoryl]amino}phosphoryl]adenosine
FORMUL      DZ4    C10 H17 N6 O11 P3

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science