Structure based on 4oqx | Ideal structure |
|
Name: 1-(2-deoxy-2-methyl-beta-d-arabinofuranosyl)-5-ethynylpyrimidine-2,4(1h,3h)-dione |
Formula: C12 H14 N2 O5 |
Weight: 266.250 |
SMILES: "C[CH]1[CH](O)[CH](CO)O[CH]1N2C=C(C#C)C(=O)NC2=O" |
Spacial conformation based on PDB
4oqx |
RESIDUE EDV 33
CONECT O01 2 C03 H1
CONECT C03 4 O01 C06 H2 H3
CONECT C06 4 C03 O08 C09 H4
CONECT O08 2 C06 C16
CONECT C09 4 C06 O11 C13 H5
CONECT O11 2 C09 H6
CONECT C13 4 C09 C15 C16 H7
CONECT C15 4 C13 H8 H9 H10
CONECT C16 4 O08 C13 N18 H11
CONECT N18 3 C16 C19 C26
CONECT C19 3 N18 O20 N21
CONECT O20 1 C19
CONECT N21 3 C19 C23 H12
CONECT C23 3 N21 O24 C25
CONECT O24 1 C23
CONECT C25 3 C23 C26 C28
CONECT C26 3 N18 C25 H13
CONECT C28 2 C25 C29
CONECT C29 2 C28 H14
CONECT H1 1 O01
CONECT H2 1 C03
CONECT H3 1 C03
CONECT H4 1 C06
CONECT H5 1 C09
CONECT H6 1 O11
CONECT H7 1 C13
CONECT H8 1 C15
CONECT H9 1 C15
CONECT H10 1 C15
CONECT H11 1 C16
CONECT H12 1 N21
CONECT H13 1 C26
CONECT H14 1 C29
END
HET EDV 33
HETSYN EDV (2'S)-2'-DEOXY-2'-METHYL-5-ETHYNYLURIDINE
HETNAM EDV 1-(2-deoxy-2-methyl-beta-D-arabinofuranosyl)-5-ethynylp
HETNAM 2 EDV yrimidine-2,4(1H,3H)-dione
FORMUL EDV C12 H14 N2 O5