Structure based on 1lnz

Ideal structure
Name: guanosine-5',3'-tetraphosphate
Formula: C10 H17 N5 O17 P4
Weight: 603.160
SMILES: "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O[P](O)(=O)O[P](O)(O)=O)[CH]3O"
Spacial conformation based on PDB 1lnz.
Also present in other 37 PDB entries.
RESIDUE   G4P     53
CONECT      PB     4 O1B  O2B  O3B  O3A 
CONECT      O1B    1 PB  
CONECT      O2B    2 PB   HOB2
CONECT      O3B    2 PB   HOB3
CONECT      O3A    2 PB   PA  
CONECT      PA     4 O3A  O1A  O2A  O5' 
CONECT      O1A    1 PA  
CONECT      O2A    2 PA   HOA2
CONECT      O5'    2 PA   C5' 
CONECT      C5'    4 O5'  C4'  H5'  H5''
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  PC  
CONECT      C2'    4 C3'  O2'  C1'  H2' 
CONECT      O2'    2 C2'  HO2'
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   O6   N1  
CONECT      O6     1 C6  
CONECT      N1     3 C6   C2   HN1 
CONECT      C2     3 N1   N2   N3  
CONECT      N2     3 C2   HN21 HN22
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      PC     4 O3'  O1C  O2C  O3C 
CONECT      O1C    1 PC  
CONECT      O2C    2 PC   H2C 
CONECT      O3C    2 PC   PD  
CONECT      PD     4 O3C  O1D  O2D  O3D 
CONECT      O1D    1 PD  
CONECT      O2D    2 PD   H2D 
CONECT      O3D    2 PD   H3D 
CONECT      HOB2   1 O2B 
CONECT      HOB3   1 O3B 
CONECT      HOA2   1 O2A 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      H2'    1 C2' 
CONECT      HO2'   1 O2' 
CONECT      H1'    1 C1' 
CONECT      H8     1 C8  
CONECT      HN1    1 N1  
CONECT      HN21   1 N2  
CONECT      HN22   1 N2  
CONECT      H2C    1 O2C 
CONECT      H2D    1 O2D 
CONECT      H3D    1 O3D 
HET    G4P             53
HETSYN     G4P guanosine tetraphosphate;ppGpp
FORMUL      G4P    C10 H17 N5 O17 P4

uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science