Structure based on 1evv

Ideal structure
Name: 5,6-dihydrouridine-5'-monophosphate
Formula: C9 H15 N2 O9 P
Weight: 326.197
SMILES: "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)N2CCC(=O)NC2=O"
Spacial conformation based on PDB 1evv.
Also present in other 59 PDB entries.
RESIDUE   H2U     36
CONECT      P      4 OP1  OP2  OP3  O5' 
CONECT      OP1    1 P   
CONECT      OP2    2 P    HOP2
CONECT      OP3    2 P    HOP3
CONECT      O5'    2 P    C5' 
CONECT      C5'    4 O5'  C4'  H5'  H5''
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      C1'    4 O4'  C2'  N1   H1' 
CONECT      C2'    4 C3'  C1'  O2'  H2' 
CONECT      O2'    2 C2'  HO2'
CONECT      N1     3 C1'  C2   C6  
CONECT      C2     3 N1   O2   N3  
CONECT      O2     1 C2  
CONECT      N3     3 C2   C4   HN3 
CONECT      C4     3 N3   O4   C5  
CONECT      O4     1 C4  
CONECT      C5     4 C4   C6   H51  H52 
CONECT      C6     4 N1   C5   H61  H62 
CONECT      HOP2   1 OP2 
CONECT      HOP3   1 OP3 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      H1'    1 C1' 
CONECT      H2'    1 C2' 
CONECT      HO2'   1 O2' 
CONECT      HN3    1 N3  
CONECT      H51    1 C5  
CONECT      H52    1 C5  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
END   
HET    H2U             36
HETNAM     H2U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
FORMUL      H2U    C9 H15 N2 O9 P1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science