Hetgroup: HN0

Structure based on 3t5k

Ideal structure

Name: 2'-deoxy-n-[(2s,3s,5r)-5-hydroxy-2-pentyltetrahydrofuran-3-yl]guanosine 5'-(dihydrogen phosphate)

Formula: C19 H30 N5 O9 P

Weight: 503.443

SMILES: "CCCCC[CH]1O[CH](O)C[CH]1NC2=Nc3n(cnc3C(=O)N2)[CH]4C[CH](O)[CH](CO[P](O)(O)=O)O4"

Spacial conformation based on PDB 3t5k.
Also present on 3t5l

RESIDUE   HN0     64
CONECT      OP3    2 P    HOP3
CONECT      C      4 C1   C3   H    HA  
CONECT      P      4 OP3  O5'  OP1  OP2 
CONECT      C1     4 C    O1   O4   H1  
CONECT      N1     3 C2   C6   HN1 
CONECT      O1     2 C1   HO1 
CONECT      C2     3 N1   N2   N3  
CONECT      N2     3 C2   C3   HN2 
CONECT      C3     4 C    N2   C7   H3  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   C5   N9  
CONECT      O4     2 C1   C7  
CONECT      C5     3 C4   C6   N7  
CONECT      C6     3 N1   C5   O6  
CONECT      O6     1 C6  
CONECT      C7     4 C3   O4   C9   H7  
CONECT      N7     2 C5   C8  
CONECT      C8     3 N7   N9   H8  
CONECT      C9     4 C7   C10  H9   H9A 
CONECT      N9     3 C4   C8   C1' 
CONECT      C1'    4 N9   C2'  O4'  H1' 
CONECT      C10    4 C9   C11  H10  H10A
CONECT      C11    4 C10  C12  H11  H11A
CONECT      C12    4 C11  C13  H12  H12A
CONECT      C13    4 C12  H13  H13A H13B
CONECT      C2'    4 C1'  C3'  H2'  H2'A
CONECT      C3'    4 C2'  O3'  C4'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      O4'    2 C1'  C4' 
CONECT      C5'    4 C4'  O5'  H5'  H5'A
CONECT      O5'    2 P    C5' 
CONECT      OP1    1 P   
CONECT      OP2    2 P    HOP2
CONECT      H      1 C   
CONECT      HA     1 C   
CONECT      H1     1 C1  
CONECT      HN1    1 N1  
CONECT      HO1    1 O1  
CONECT      HN2    1 N2  
CONECT      H3     1 C3  
CONECT      H7     1 C7  
CONECT      H8     1 C8  
CONECT      H9     1 C9  
CONECT      H9A    1 C9  
CONECT      H1'    1 C1' 
CONECT      H10    1 C10 
CONECT      H10A   1 C10 
CONECT      H11    1 C11 
CONECT      H11A   1 C11 
CONECT      H12    1 C12 
CONECT      H12A   1 C12 
CONECT      H13    1 C13 
CONECT      H13A   1 C13 
CONECT      H13B   1 C13 
CONECT      H2'    1 C2' 
CONECT      H2'A   1 C2' 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H5'A   1 C5' 
CONECT      HOP3   1 OP3 
CONECT      HOP2   1 OP2 
END   
HET    HN0             64
HETNAM     HN0 2'-deoxy-N-[(2S,3S,5R)-5-hydroxy-2-pentyltetrahydrofura
HETNAM   2 HN0 n-3-yl]guanosine 5'-(dihydrogen phosphate)
FORMUL      HN0    C19 H30 N5 O9 P1

This OCA

MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)