Structure based on 1kek | Ideal structure |
|
Name: 2-acetyl-thiamine diphosphate |
Formula: C14 H21 N4 O8 P2 S |
Weight: 467.351 |
SMILES: "CC(=O)c1sc(CCO[P](O)(=O)O[P](O)(O)=O)c(C)[n+]1Cc2cnc(C)nc2N" |
Spacial conformation based on PDB
1kek. Also present in other
10 PDB entries. |
RESIDUE HTL 50
CONECT N1' 2 C2' C6'
CONECT C2' 3 N1' C2A N3'
CONECT C2A 4 C2' H2A1 H2A2 H2A3
CONECT N3' 2 C2' C4'
CONECT C4' 3 N3' N4' C5'
CONECT N4' 3 C4' H4'1 H4'2
CONECT C5' 3 C4' C6' C35
CONECT C6' 3 N1' C5' H6'
CONECT C35 4 C5' N3 H351 H352
CONECT N3 3 C35 C2 C4
CONECT C2 3 N3 S1 C1'
CONECT S1 2 C2 C5
CONECT C5 3 S1 C4 C5A
CONECT C4 3 N3 C5 C4A
CONECT C4A 4 C4 H4A1 H4A2 H4A3
CONECT C5A 4 C5 C5B H5A1 H5A2
CONECT C5B 4 C5A O5G H5B1 H5B2
CONECT O5G 2 C5B P1
CONECT P1 4 O5G O11 O12 O13
CONECT O11 2 P1 P2
CONECT O12 1 P1
CONECT O13 2 P1 HO1
CONECT P2 4 O11 O21 O22 O23
CONECT O21 1 P2
CONECT O22 2 P2 H22O
CONECT O23 2 P2 H23O
CONECT C1' 3 C2 O2' C3'
CONECT O2' 1 C1'
CONECT C3' 4 C1' H3'1 H3'2 H3'3
CONECT H2A1 1 C2A
CONECT H2A2 1 C2A
CONECT H2A3 1 C2A
CONECT H4'1 1 N4'
CONECT H4'2 1 N4'
CONECT H6' 1 C6'
CONECT H351 1 C35
CONECT H352 1 C35
CONECT H4A1 1 C4A
CONECT H4A2 1 C4A
CONECT H4A3 1 C4A
CONECT H5A1 1 C5A
CONECT H5A2 1 C5A
CONECT H5B1 1 C5B
CONECT H5B2 1 C5B
CONECT H22O 1 O22
CONECT H23O 1 O23
CONECT H3'1 1 C3'
CONECT H3'2 1 C3'
CONECT H3'3 1 C3'
CONECT HO1 1 O13
END
HET HTL 50
HETSYN HTL 2-ACETYL-3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-4-M
HETSYN 2 HTL ETHYL-5-(4,6,6-TRIHYDROXY-3,5-DIOXA-4,6-DIPHOSPHAHEX-1-
HETSYN 3 HTL YL)THIAZO LIUM INNER SALT P,P'-DIOXIDE
HETNAM HTL 2-ACETYL-THIAMINE DIPHOSPHATE
FORMUL HTL C14 H21 N4 O8 P2 S1 1+