Structure based on 4ru9

Ideal structure
Name: n-{2-amino-5-[formyl(methyl)amino]-6-hydroxypyrimidin-4-yl}-2-deoxy-5-o-phosphono-beta-d-erythro-pentofuranosylamine
Formula: C11 H18 N5 O8 P
Weight: 379.263
SMILES: "CN(C=O)c1c(O)nc(N)nc1N[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2"
Spacial conformation based on PDB 4ru9.
Also present on 4rua, 4ruc
RESIDUE   MF7     43
CONECT      P1     4 OP1  O5'  OP2  OP3 
CONECT      OP1    1 P1  
CONECT      O5'    2 P1   C5' 
CONECT      C5'    4 O5'  C4'  H2   H3  
CONECT      C4'    4 C5'  C3'  O4'  H4  
CONECT      C3'    4 C4'  O3'  C2'  H5  
CONECT      O3'    2 C3'  H6  
CONECT      C2'    4 C3'  C1'  H7   H8  
CONECT      C1'    4 C2'  O4'  N9   H9  
CONECT      O4'    2 C4'  C1' 
CONECT      N9     3 C1'  C4   H10 
CONECT      C4     3 N9   C5   N3  
CONECT      C5     3 C4   N7   C6  
CONECT      N7     3 C5   C8   C3  
CONECT      C8     3 N7   O4   H12 
CONECT      N3     2 C4   C2  
CONECT      C2     3 N3   N2   N1  
CONECT      N2     3 C2   H13  H14 
CONECT      N1     2 C2   C6  
CONECT      C6     3 C5   N1   O6  
CONECT      O6     2 C6   H11 
CONECT      OP2    2 P1   H15 
CONECT      C3     4 N7   H16  H17  H18 
CONECT      O4     1 C8  
CONECT      H2     1 C5' 
CONECT      H3     1 C5' 
CONECT      H4     1 C4' 
CONECT      H5     1 C3' 
CONECT      H6     1 O3' 
CONECT      H7     1 C2' 
CONECT      H8     1 C2' 
CONECT      H9     1 C1' 
CONECT      H10    1 N9  
CONECT      H12    1 C8  
CONECT      H13    1 N2  
CONECT      H14    1 N2  
CONECT      H15    1 OP2 
CONECT      H16    1 C3  
CONECT      H17    1 C3  
CONECT      H18    1 C3  
CONECT      H11    1 O6  
CONECT      OP3    2 P1   H20 
CONECT      H20    1 OP3 
END   
HET    MF7             43
HETNAM     MF7 N-{2-amino-5-[formyl(methyl)amino]-6-hydroxypyrimidin-4
HETNAM   2 MF7 -yl}-2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosy
HETNAM   3 MF7 lamine
FORMUL      MF7    C11 H18 N5 O8 P1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science